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RTP_02272018_0_2um_scaffold_978_18

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 14511..15221

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis sigma factor n=1 Tax=Thiobacillus denitrificans RepID=UPI0003789B46 similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 236.0
  • Bit_score: 437
  • Evalue 7.30e-120
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 236.0
  • Bit_score: 432
  • Evalue 6.70e-119
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 236.0
  • Bit_score: 432
  • Evalue 3.30e-118

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGGCAGACAAGCAAACGTCGTTGGACGAGCAAGTCAATAAATATGCGCCGCTGGTCAAGCGCATTGCGTATCACATGATGGCGCGCCTGCCCGCCAGCGTAGAAGTCGACGACCTCATTCAGGTCGGCTTGATCGGCCTGATGGATGCGGTGTCCCGCTTCGACGGCACCCAGGGCGCCCAATTCGAATCCTATGCAACCCAGCGTGTCCGCGGTTCCATGCTCGACGAACTGCGCGAGGCGGATTGGCTGCCGCGTCACGTGCGGCAAAAGTCGCGGCAAATCGAAGCGGCCATCCACAGGCTGGAACAGCGCAACGGCAAGTCGCCGTCCGATCAGGAAATCTCTGCCGAAATGGGCCTGCCCATCGATCAGTACCAATCCATGCTGGGCGACGTGAAGTGCTCCCAACTGCTGTATTACGAAGACTTTTCGGACGAAGACAGCGCCAGCTTTCTGGAGCGCTATCTGGTCAACGGCAGCGACGATCCGCTCGCCGTGCTGGAGGACGGAGGCTTTCGCGGCAGCCTGGTCGCGGCAATCCACCACCTGCCCGAACGCGAGCGCAGCATGATGGGCATGTACTACGAACAGGACATGAACCTGAAGGAAATTGGCGTGGTGCTGGGCGTGTCCGAATCGCGCGTCTGCCAGTTGCATTCGCAGGCGGTTGCCCGCCTGCGCGCCCAGCTCAAGATATGGAAAGACTGA
PROTEIN sequence
Length: 237
MADKQTSLDEQVNKYAPLVKRIAYHMMARLPASVEVDDLIQVGLIGLMDAVSRFDGTQGAQFESYATQRVRGSMLDELREADWLPRHVRQKSRQIEAAIHRLEQRNGKSPSDQEISAEMGLPIDQYQSMLGDVKCSQLLYYEDFSDEDSASFLERYLVNGSDDPLAVLEDGGFRGSLVAAIHHLPERERSMMGMYYEQDMNLKEIGVVLGVSESRVCQLHSQAVARLRAQLKIWKD*