ggKbase home page

RTP_02272018_0_2um_scaffold_449_1

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(158..1855)

Top 3 Functional Annotations

Value Algorithm Source
secretion system protein E n=1 Tax=Thiobacillus thioparus RepID=UPI0003639D30 similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 565.0
  • Bit_score: 1058
  • Evalue 0.0
ATPase, type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 565.0
  • Bit_score: 1030
  • Evalue 0.0
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 565.0
  • Bit_score: 1046
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
ATGGAACGCCGCAAAAAACTAAGGATGGGCGAAACCCTGATTGCACAGGGCCTCATCACCACCGACCAGCTGCGCATCGGGCTCAAGGAACAAAAAACTACCGGCCTGCCGATCGGTCGCCAGCTTGTCGCGCTGGGCTTCATGACCGAGGCGGTGCTGCGCGACCAGCTCGCCAATGCGCTGGGCAGCCAGGGCATCGATCTCACCCAGGTGGTGGCTGACCCCGAAGCCCTGCAACTGGTGCCCGAGGAATTCGCCCGCCGCCACCATCTGCTGCCGATCGCGCACGATGCCGCGCGCAATGTGCTGACGCTGGCGACCACCGACATGTTCAACGTCGTCGCGCTCGACCAGTTGAAGGCCGCGCTCGGCGGCCAGCTTGAAATCCACACCCTGCTGGCGGCCGAAGCACAGTTGCTCGACTGCATCGACAAGTTCTACGGCTTCGACCTCTCGCTCGACGGCATCCTGCGCGAAATCGAAACCGGCGAAGTCGACTACGCCAGCCTCAATCCCGAGACCGAGGAATACACCCAGCCGGTGGTGCGGCTGGTCGGGGCGCTGCTCACCGATGCGATGAAGCGCGAATCCTCCGACATCCACTTCGAGCCCGAGCACGCTTTTTTGCGCATCCGCTACCGCATCGACGGCGTGCTGGAACAGATCCGCAGCCTGCACAAAACCTACTGGCCGGGCATCCTGGTGCGGCTGAAGGTGTTGTCCGGGATGAACATCGCGGAAACGCGCGCGCCGCAGGACGGTCGCATGTCGCTGACGCTGAACGGCCGCCCGATCGATTTCCGGGTGTCCTCGCAACCCGGCATCCACGGCGAAAACCTGGTGCTGCGCATCCTCGACCGCGAAAAATCCATCGTGCCGCTGGAGCAGATGGGGTTCAGCGCCAACGCGCTGCGCGAACTGCATCTGATGATGGCGCGGCCGGAAGGCATTCTGGTGGTCACCGGACCGACCGGCTCCGGCAAAACCACCACGCTGTATTCGATGCTCACGCATCTGAACAACGAGACAGTGAACATCATGACGCTGGAAGATCCGGTCGAATATCCGGTCACGCTGATGCGCCAGAGCTCGGTCAACGAAACGATAAAACTCGATTTCGCCAACGGCATCCGCTCCATCATGCGGCAGGATCCCGACATTATTCTGGTCGGCGAAATCCGCGACAAGGACACCGCCGAAATGGCCTTCCGCGCCGCCATGACCGGCCACCAGGTGTTCACCACCCTGCACACCAACTCCGCGCTCGGCGTGTTTCCGCGGCTGATGGACATCGGCATCCAGCCCGGCATTCTGTCCGGCAACATCATCGGCGTCGTCGCGCAGCGGCTGGTTCGCAAACTCTGCCCGCACTGCAAGGAAGCCTACACGCCGGACGAACACGAAGCCGGCATCCTCGGCGCCGACCCGGCCCACCCGCCGCAAATTTATCGCGCCGCTGGCTGCCCGGCGTGCAGCAACAAAGGCTACAAAGGCCGCCTGGCCCTGATCGAATTGCTGCGTATGGACCCCACGCTGGACGAACTGGTGGCCAACCATGCGCCCCTGCACGAAATCCGCCGCGCGGCATTCGAGCATGGATACCACCCCCTGGCGGAAGACGGCATCCAGCGTGTCAAGGATGGCATCACCTCGCTGGCGGAAGTGGCGCGGGTGGTGGATTTGACTGGGCGGGTGTGA
PROTEIN sequence
Length: 566
MERRKKLRMGETLIAQGLITTDQLRIGLKEQKTTGLPIGRQLVALGFMTEAVLRDQLANALGSQGIDLTQVVADPEALQLVPEEFARRHHLLPIAHDAARNVLTLATTDMFNVVALDQLKAALGGQLEIHTLLAAEAQLLDCIDKFYGFDLSLDGILREIETGEVDYASLNPETEEYTQPVVRLVGALLTDAMKRESSDIHFEPEHAFLRIRYRIDGVLEQIRSLHKTYWPGILVRLKVLSGMNIAETRAPQDGRMSLTLNGRPIDFRVSSQPGIHGENLVLRILDREKSIVPLEQMGFSANALRELHLMMARPEGILVVTGPTGSGKTTTLYSMLTHLNNETVNIMTLEDPVEYPVTLMRQSSVNETIKLDFANGIRSIMRQDPDIILVGEIRDKDTAEMAFRAAMTGHQVFTTLHTNSALGVFPRLMDIGIQPGILSGNIIGVVAQRLVRKLCPHCKEAYTPDEHEAGILGADPAHPPQIYRAAGCPACSNKGYKGRLALIELLRMDPTLDELVANHAPLHEIRRAAFEHGYHPLAEDGIQRVKDGITSLAEVARVVDLTGRV*