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RTP_02272018_0_2um_scaffold_2946_3

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 4283..5680

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000369EEF4 similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 465.0
  • Bit_score: 775
  • Evalue 2.90e-221
RND efflux system outer membrane lipoprotein NodT similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 469.0
  • Bit_score: 687
  • Evalue 1.70e-195
RND efflux system outer membrane lipoprotein NodT {ECO:0000313|EMBL:AAZ97369.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 469.0
  • Bit_score: 687
  • Evalue 8.60e-195

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1398
ATGAGCCCGTTACGCACCCTGACCGTTGCAATTGCCGCCAGCCTGGCGAGTGCCTGCACGATGATGCCGGACTATCAGCGCCCCGTGGCGCCGGTGCCGGCGAATTTTCCGAATGCGCCGCAGGCCTCTACGGCGACGCCGGCCGACGCCATCGTCTGGCGCGACTATTTCGCCCATGCACAACTGCGCGACGTAATCGCGCTGGCGCTCGCCAATAACCGCGACCTGCGCGTCGCTGCGCTCAACATCGAGAAAGCGCGTGCGCAGCACCGCATCCAGCGCGCCGACCTGTTCCCCGCCATCGGTGCAACAGGCAGCCAGACCGCACAGCGACTGCCGGGCGCACTGACCAGCAGCGGCGAGGCCGAAATCAACCGCCAGTACAACGCCATGATCGGTTTTTCCGCTTACGAGCTGGACTTCTTCGGTCGTATTCGCAGCCTCAACGCAGCGGCACTGGAGCAATATCTCGGCACTGAGGAAGCGCGCCGCAGCGCCCAGATCAGCCTGGTGGCCGAAGTCGCCGGCACCTGGCTGACACTCGCGTTTGACAATGAACGTTTGGCACTGGCGCGCAGCACCTACGAAACGCGGCAGAAGTCCCATGATCTGATCCGCCGCAGCTTCGAAGCCGGTGCGGTCTCGGCGCTCGACCTGAACCAATCGCAGCAACTACTGCAAAGCGCCCGTGCCGACGTTGCGCGATACACCAGCTTCGCCGCGCAGAACGGGAACGCGCTCTCACTCGTTGTCGGCGCCCCGGTGCCGGCCGACCTGCTGCCCGCCACGATCACCGACACAGTCAGCACTGTGGCCGAATTGCCAACTGGCGTGCCTTCCGATGTGCTCACCCGCCGCCCCGATATCCTGCAAGCCGAACGCGCGCTGCGTGCGGCCAATGCGAGCATCGGCGCCGCACGCGCGGCTTTCTTCCCAAGCATAACGCTGACCGCCGCCGCCGGCACCGCCAGCAGCACCCTGGACGGCCTGTTCAGTGGAGGATCCGGAGCCTGGAGCTTCATCCCGCTGATCCGCATTCCTGTTTTCGAGGCGGGCCGCTTGCAGGCGAGCCTGGACGTAGCCGAGGTGCAGCGCGACATCAACGTGGCGCAGTACGAGAAGGCTATCCAGAGCGCCTTCCGGGAGGTGGCCGATGCGTTGGCAGACCGTGCCTCGCTCGCCGAACGGCTTGACGCCCGGTACCAGCAGGTTGAGGCCACGCAGGCAGCTTTCCGCCTGTCGGATGCGCGTTACAAGGGCGGGGCGGACAGCTTCCTGGGCTTGCTCGACGCCCAGCGCTCGCTCTACCTTGCCGAACAGGAGTTGATCATCGTGCGGCTAGCCGACGCCGCCAACCGCGTGACGCTGTACAAGGTACTCGGCGGCGGTTGGCGATGA
PROTEIN sequence
Length: 466
MSPLRTLTVAIAASLASACTMMPDYQRPVAPVPANFPNAPQASTATPADAIVWRDYFAHAQLRDVIALALANNRDLRVAALNIEKARAQHRIQRADLFPAIGATGSQTAQRLPGALTSSGEAEINRQYNAMIGFSAYELDFFGRIRSLNAAALEQYLGTEEARRSAQISLVAEVAGTWLTLAFDNERLALARSTYETRQKSHDLIRRSFEAGAVSALDLNQSQQLLQSARADVARYTSFAAQNGNALSLVVGAPVPADLLPATITDTVSTVAELPTGVPSDVLTRRPDILQAERALRAANASIGAARAAFFPSITLTAAAGTASSTLDGLFSGGSGAWSFIPLIRIPVFEAGRLQASLDVAEVQRDINVAQYEKAIQSAFREVADALADRASLAERLDARYQQVEATQAAFRLSDARYKGGADSFLGLLDAQRSLYLAEQELIIVRLADAANRVTLYKVLGGGWR*