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RTP_02272018_0_2um_scaffold_15161_1

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(2..790)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 263.0
  • Bit_score: 511
  • Evalue 6.30e-142
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 263.0
  • Bit_score: 511
  • Evalue 1.30e-142
Transcription termination factor Rho id=1350670 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 263.0
  • Bit_score: 511
  • Evalue 2.60e-142

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGCATCTTTCCGAACTCAAGCAAAAACCCATCACCGAGCTACTCGAGATCGCCGCTGCCAATGGCATCGACAACGCGAACCGTTTTCGCAAACAGGAACTGATCTTCACGATCCTGAAAACGCTGGCCAAGCGCGGCGAGAGCATTTACGGCGATGGCGTGCTGGAAGTACTGCCCGATGGGTTCGGATTCCTGCGGTCGCCTGAAACCTCGTACCTGGCCAACACCGACGACATCTACGTGTCGCCGTCGCAGATCCGCCGCTTCAACCTGCACACCGGTGACAAGATCGAAGGCGAAATTCGCACCCCGAAGGATGGCGAGCGCTATTCGGCGATGACCAAGCTCGACCTGATCAACGGCGAGCCGCCCGAAGCCAGCAAGAACAAGATCCTGTTCGAGAACCTCACCCCGCTGCACCCGGACAAGCCGCTCAAGCTGGAGCGCGAGATCAAGGCTGAGGAAAACATCACCAGCCGCGTCATCGACATCGTCGCGCCGATCGGCAAAGGCCAGCGCGGTCTGCTGGTAGCGCCGCCGAAAACGGGTAAAACCGTGATGCTGCAGCACATCGCGCACGCGATCAGCTCCAACCATCCCGAGGTCGTGCTGTTCGTCCTGCTGATCGATGAACGTCCGGAAGAAGTGACTGAAATGAGTCGCACCGTGCGCGGCGAAGTGGTCGCCTCGACCTTCGACGAACCCGCCAGCCGCCACGTGCAGGTCGCCGAAATGGTGATCGAGCGCGCCAAGCGCCTGGTCGAGCACAAGAAGGACGTGGTGATTCTG
PROTEIN sequence
Length: 263
MHLSELKQKPITELLEIAAANGIDNANRFRKQELIFTILKTLAKRGESIYGDGVLEVLPDGFGFLRSPETSYLANTDDIYVSPSQIRRFNLHTGDKIEGEIRTPKDGERYSAMTKLDLINGEPPEASKNKILFENLTPLHPDKPLKLEREIKAEENITSRVIDIVAPIGKGQRGLLVAPPKTGKTVMLQHIAHAISSNHPEVVLFVLLIDERPEEVTEMSRTVRGEVVASTFDEPASRHVQVAEMVIERAKRLVEHKKDVVIL