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RTP_03222018_0_1um_scaffold_193_24

Organism: RTP_03222018_0_1um_Hydrogenophilales_59_110

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(18064..19497)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 478.0
  • Bit_score: 805
  • Evalue 4.50e-231
RNA polymerase sigma-54 factor id=1353384 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 477.0
  • Bit_score: 826
  • Evalue 8.70e-237
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 477.0
  • Bit_score: 826
  • Evalue 1.20e-236

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGAAGCACAGCCTCCAGCTCAAGCTCGGTCAGCACCTTACCCTGACACCTCAATTGCAGCAGTCGATCCGGCTGTTGCAGCTGTCTACGCTCGAATTAAACCAGGAACTGGAGCAGATTCTCCAGGACAACCCCCTGCTCGAGCGTGAAGAAGAGGACGAAGCACGACAGGAGGCTTCTGACCCCCCGACACATGCCGCCGAAGCTGAAATCCAGAACACCGAAGTGGCACCGCGAGACACGGCCGACACCGAGCCGGTGACCGCCCAGGATGACTCAGACTGGAACGATTACAGTCCATCCGGGAGCGACGACGATGAAGGCGACTATGCCGAGGGATCGATTGCCGGTTCAACCCTTCGCGAACATCTGCTGAACCAGTTGATTGTCAGCCCGCTGACCCTGCGCGACAGAACCCTGGTCGCCGCGCTCATTGATGATCTGGACGACGCCGGCCTGCTCTCCCAACCGCTGGCGGACATTTTAGAAAGTTTGCAGGCCGAGCTGGAAGAGCTGGAACCCGAAGAGTTGGAAACGGCTCTCAAACACCTGCAAAACATGGACCCAACGGGCGTTGGCGCACGCAACCTGGCGGAATGCCTGACCTTGCAGTTGCGCGCCCTGCCGCCCGACACCCCGGTACGCGATGAAGCCATGCGGCTGACGACGCATTACCTGGACCTACTGGCTGCGCGCGACGTGGGCAAACTCAAAAAAGTGCTCGGCATCGACGACCCCACGCTACGGGCTGCGCGTGCCCTGATTCTCTCGCTCAATCCGCGCCCGGGAGCTGCTTTCGGTGCCGATGACACTCATTATGTGATTCCGGACGTGCATGTGCGCAAGGTCAAGGGCATGTGGATCGCCAGCCTGAACGCGGATGCCATGCCCAAGCTGCGGGTCAATCGCGTCTACGCCGACATCCTGTCGCGTCACCGCGAAGGGGGCGGCGGACAGCTTGCCAGCCAATTGCAGGAAGCCCGCTGGCTGATTAAAAACGTACAACAACGGTTTGACACCATTCTGCGCGTCTCGCAAGCGATCGTTGATCGCCAGAAACACTTTTTCGAGCACGGTGAAGTGGCGATGCGGCCCTTGGTGCTGCGCGAAATTGCCGATACGGTGGAACTGCACGAATCGACCATTTCGCGCGTCACCACCCAAAAGTTCATGATGACGCCACGCGGCTTGTACGAATTGAAATATTTTTTCGGCAGCCATGTGTCGACCGACAATGGTGGGGCCTGCTCATCAACCGCCATTCGCGCGCTGATCAAGCAACTGATCGCAGCCGAAGGGGGGGGGAAACCGCTTTCCGATGGTCAATTGGCCGAAGTGCTGAGTCAGCAAGGCATCGTGGTGGCTCGCCGCACGGTCGCCAAGTATCGCGAATCGATGCATATCCCGCCCGCGAACATGCGTCGAGCGTTGTGA
PROTEIN sequence
Length: 478
MKHSLQLKLGQHLTLTPQLQQSIRLLQLSTLELNQELEQILQDNPLLEREEEDEARQEASDPPTHAAEAEIQNTEVAPRDTADTEPVTAQDDSDWNDYSPSGSDDDEGDYAEGSIAGSTLREHLLNQLIVSPLTLRDRTLVAALIDDLDDAGLLSQPLADILESLQAELEELEPEELETALKHLQNMDPTGVGARNLAECLTLQLRALPPDTPVRDEAMRLTTHYLDLLAARDVGKLKKVLGIDDPTLRAARALILSLNPRPGAAFGADDTHYVIPDVHVRKVKGMWIASLNADAMPKLRVNRVYADILSRHREGGGGQLASQLQEARWLIKNVQQRFDTILRVSQAIVDRQKHFFEHGEVAMRPLVLREIADTVELHESTISRVTTQKFMMTPRGLYELKYFFGSHVSTDNGGACSSTAIRALIKQLIAAEGGGKPLSDGQLAEVLSQQGIVVARRTVAKYRESMHIPPANMRRAL*