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RTP_03222018_0_1um_scaffold_1316_2

Organism: RTP_03222018_0_1um_Hydrogenophilales_59_110

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(654..2897)

Top 3 Functional Annotations

Value Algorithm Source
Lysine decarboxylase {ECO:0000313|EMBL:AAZ98059.1}; EC=4.1.1.18 {ECO:0000313|EMBL:AAZ98059.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 747.0
  • Bit_score: 1432
  • Evalue 0.0
ornithine decarboxylase (EC:4.1.1.17) similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 747.0
  • Bit_score: 1432
  • Evalue 0.0
lysine decarboxylase n=1 Tax=Thiobacillus thioparus RepID=UPI00036C1573 similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 747.0
  • Bit_score: 1462
  • Evalue 0.0

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2244
ATGCGCTTTCGTTTCCCCGTTATCATCATTGATGAAGACTTTCGTTCCGAGAACGCCTCCGGTCTGGGTATCCGCACCCTGGCCGAAGCGATCGAGAAAGAAGGCATTGAAGTACTCGGCGTCACCAACTACGGCGACCTGACCTCGTTCGCCCAGCAGCAGGCGCGTGCGTCGGCATTTGTGCTGTCTATCGACGACGAGGAACTGGCGGGCTCGGACGAAGACACCAATATCGCGTTGCAAAAATTGCGCAGTTTTGTTGAGGAAGTGCGCTTCCGCAACGCGGAAATCCCGATTTTTCTGCATGGCGAAACGCGCACTGCGCGCCATATTCCCAACGATATCCTGCGCGAGCTCAGCGGTTTCATCCATATGCTGGAAGATACACCGGAGTTCCTGGCGCGCTACATTCTGCGCGAAGCTCGGACCTACCTTGAATCCCTGGTACCCCCTTTTTTCCGGGCGCTGACTCACTACGCGGCGGATGGATCGTATTCCTGGCATTGTCCGGGCCACTCAGGCGGCGTGGCCTTCCTGAAGTCCCCGATCGGCCAGATGTTCCATCAGTTCTTCGGCGAGAATCTGCTGCGCGCCGACGTTTGCAACGCGGTAGACGAGTTGGGTCAATTGCTCGATCACACCGGCCCGGTGGGCGCGTCAGAGCGCAATGCGGCGCGCATCTTCAACTGCGACCATCTGTTCTTTGTGACCAACGGCACTTCATCGTCCAACAAGATGGTGTGGCACGCCACCGTGGCGCCGGGCGACATCGTCGTGGTCGACCGCAACTGCCACAAGTCCATCCTGCACGCCATCATGATGTGCGGCGCGATTCCGATTTTCCTGACGCCAACGCGCAACCACTACGGCATCATCGGGCCGATCCCGCTGGACGAGTTCCGACCGGAAAACATCGAGAGAAAGATCGCCGCCCATCCCTTTGCCAAGGATGTAAAACGCAAGCCGCGTATTCTCACGATTACCCAGTCAACCTACGACGGCATTCTCTACAACGTCGACATGATCAAGGAACTGCTGGGCGACTACATCGATACTCTGCATTTTGATGAAGCCTGGCTGCCGCATGCAACTTTCCACGACTTCTACCGCGGCATGCATGCCATCGGCAAGAACCGTCCGCGTGCCAAGGATGCGCTGGTGTTTGCTACACAGTCGACGCACAAGTTGCTGGCCGGTTTGAGCCAGGCTTCGCAAATCCTGGTGCAGGACTCGGAAACGCGCAAGCTCGATTTCCATCGCTTCAATGAAGCCTATCTGATGCACACCTCGACCTCGCCGCAGTACGCCATCATCGCCTCGTGTGATGTGGCTGCAGCGATGATGGAATCGCCTGGCGGGCCTGCGCTGGTCGAGGAATCCATCCGCGAGGCATTGGATTTCCGTCGGGCCATCCGCAAGGTTGACGAGGAGTTTGGCGACTCCTGGTGGTTCAAGGTGTGGGGCCCGCAGAAACTGGCGGAGGAGGGTGTCGGCGACCGCGAGGACTGGATGCTCGGCAACGACGAGCGGTGGCATGAGTTCGGCCATATTGCCCCAGGCTTTAACATGCTCGACCCGATCAAGGCCACCGTGATTACACCGGGACTCGACATGGAAGGCGCCTTCGCCGACTGGGGCATACCAGCGGCGATTGTGACCAAATATCTGGCCGAGCACGGTGTCATCGTGGAAAAAACCGGCTTGTATTCGTTTTTCATCATGTTCACCATCGGCATTACCAAGGGTCGCTGGAACACGCTGGTGACCGCGTTGCAGCAGTTCAAGGCCGATTACGACGAAAACCAGCCGTTGTGGCGTGTGCTGCCTGATTTCATTTTGAAACATCCCCGCTACGAGAAAACCGGCCTCAAGGATTTGTGCGACCAGATTCATACGGTCTACAAGGCCAATGATGTGGCACGCCTGACAACTGAAATGTACCTGTCGGAGATGGCCCCGGCGATGAAGCCGGCAGATGCCTTCGCCAAGATGGCACACCGTGAAATCGAACGGGTGGCGCTCGATGAACTTGAAGGTCGCATCACCGCGATGCTGGTGACGCCTTATCCACCGGGCATTCCCTTGCTGATTCCGGGCGAGCGATTCAACGCCACCATCGTGCGCTATTTGCAGTTCACCCGCGATTTCAACGAGAAATTCCCCGGCTTCGAGACCGATGTGCATGGTTTTGTCGACGAAGTGGTCGATGGCAAGACCCAATACTATGTCGACTGCGTGATGTGA
PROTEIN sequence
Length: 748
MRFRFPVIIIDEDFRSENASGLGIRTLAEAIEKEGIEVLGVTNYGDLTSFAQQQARASAFVLSIDDEELAGSDEDTNIALQKLRSFVEEVRFRNAEIPIFLHGETRTARHIPNDILRELSGFIHMLEDTPEFLARYILREARTYLESLVPPFFRALTHYAADGSYSWHCPGHSGGVAFLKSPIGQMFHQFFGENLLRADVCNAVDELGQLLDHTGPVGASERNAARIFNCDHLFFVTNGTSSSNKMVWHATVAPGDIVVVDRNCHKSILHAIMMCGAIPIFLTPTRNHYGIIGPIPLDEFRPENIERKIAAHPFAKDVKRKPRILTITQSTYDGILYNVDMIKELLGDYIDTLHFDEAWLPHATFHDFYRGMHAIGKNRPRAKDALVFATQSTHKLLAGLSQASQILVQDSETRKLDFHRFNEAYLMHTSTSPQYAIIASCDVAAAMMESPGGPALVEESIREALDFRRAIRKVDEEFGDSWWFKVWGPQKLAEEGVGDREDWMLGNDERWHEFGHIAPGFNMLDPIKATVITPGLDMEGAFADWGIPAAIVTKYLAEHGVIVEKTGLYSFFIMFTIGITKGRWNTLVTALQQFKADYDENQPLWRVLPDFILKHPRYEKTGLKDLCDQIHTVYKANDVARLTTEMYLSEMAPAMKPADAFAKMAHREIERVALDELEGRITAMLVTPYPPGIPLLIPGERFNATIVRYLQFTRDFNEKFPGFETDVHGFVDEVVDGKTQYYVDCVM*