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RTP_03222018_0_2um_scaffold_608

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Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_608_1
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

329..757
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T471_META2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE23808.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
RTP_03222018_0_2um_scaffold_608_2
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

754..972
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI000381D08A
Uncharacterized protein {ECO:0000313|EMBL:EAT04358.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
hypothetical protein
RTP_03222018_0_2um_scaffold_608_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1198..1971)
DNA (774bp) protein (258aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III xth id=1358715 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_608_4
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1968..2132)
DNA (165bp) protein (55aa)
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
RTP_03222018_0_2um_scaffold_608_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2167..2718)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B92D7
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_608_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2921..4960)
DNA (2040bp) protein (680aa)
oligopeptidase A (EC:3.4.24.70)
oligopeptidase A n=1 Tax=Thiobacillus thioparus RepID=UPI00037060C3
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_608_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5027..5575
DNA (549bp) protein (183aa)
carbonic anhydrase id=12494168 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
carbonic anhydrase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_608_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5601..6095
DNA (495bp) protein (165aa)
thioredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI00037EE57F
thioredoxin
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_608_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6095..6352
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381767B
Uncharacterized protein {ECO:0000313|EMBL:EIJ35143.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
RTP_03222018_0_2um_scaffold_608_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6371..8035
DNA (1665bp) protein (555aa)
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003718F1E
ABC transporter ATP-binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_608_11
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(8032..8337)
DNA (306bp) protein (102aa)
Plasmid stabilization system n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3ECY1_CHLL2
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:ACD90406.1}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium limicola (strain DSM 245 / NBRC 103803).;"
RTP_03222018_0_2um_scaffold_608_12
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8334..8615)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JGM6_BURVG
hypothetical protein
Tax=GWA2_Gallionellales_59_43_curated
RTP_03222018_0_2um_scaffold_608_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8800..9246
DNA (447bp) protein (149aa)
Putative uncharacterized protein id=1358708 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_608_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9262..9480)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000378A97E
SlyX protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_608_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9480..10013)
DNA (534bp) protein (178aa)
alkyl hydroperoxide reductase id=12494162 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
alkyl hydroperoxide reductase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_608_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10042..10425
DNA (384bp) protein (128aa)
transmembrane protein; K08973 putative membrane protein id=12494161 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_608_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10489..11685
DNA (1197bp) protein (399aa)
N6-adenine-specific DNA methylase id=1358215 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
N-6 adenine-specific DNA methylase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_608_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11694..11963
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F0A7F
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_608_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11975..13102)
DNA (1128bp) protein (376aa)
Pilus retraction protein PilT id=1358217 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
pilus retraction protein PilT
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_608_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13113..14156)
DNA (1044bp) protein (348aa)
Pilus retraction protein PilT id=1358218 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
pilus retraction ATPase PilT
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_608_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14242..14949
DNA (708bp) protein (236aa)
hypothetical protein; K06997 id=12494578 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_608_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15364..15606
DNA (243bp) protein (81aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
pyrroline-5-carboxylate reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003684BA5
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_608_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15603..16043
DNA (441bp) protein (147aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
pyrroline-5-carboxylate reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003684BA5
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_608_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16040..16615
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003713192
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_608_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16975..18879
DNA (1905bp) protein (635aa)
Putative uncharacterized protein id=1328433 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_608_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18911..20635)
DNA (1725bp) protein (575aa)
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003817111
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_608_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20632..20901)
DNA (270bp) protein (90aa)
phosphocarrier protein HPr n=1 Tax=Thiobacillus denitrificans RepID=UPI0003760CFB
HPrNtr
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_608_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20882..21298)
DNA (417bp) protein (139aa)
PTS fructose transporter subunit IIA n=1 Tax=Thiobacillus thioparus RepID=UPI000362A3DF
pentitol phosphotransferase enzyme IIA component
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_608_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21411..22427)
DNA (1017bp) protein (339aa)
putative thaimine biosynthesis protein; K03734 thiamine biosynthesis lipoprotein id=12493748 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
thaimine biosynthesis protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_608_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22424..23377)
DNA (954bp) protein (318aa)
glutathione synthase (EC:6.3.2.3); K01920 glutathione synthase [EC:6.3.2.3] id=12493749 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glutathione synthase (EC:6.3.2.3)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 105 in total

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