ggKbase home page

RTP_082018_0_1um_scaffold_8256_3

Organism: RTP_082018_0_1um_Sphingobacteria_36_342

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 13 / 38
Location: comp(2011..2712)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU42_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 228.0
  • Bit_score: 201
  • Evalue 6.70e-49
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 228.0
  • Bit_score: 201
  • Evalue 1.90e-49
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 233.0
  • Bit_score: 456
  • Evalue 1.60e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 702
ATGTCTATTCCTTTTTTTTACGAAGCACTATTGCCACCAAATCCAGGTTTGTTCACCCTTTCTGAGGAATCTAGTAAGCATTGTAGTATTGTTTTGAGAATGAAAACAGGATCTATCATTGCTTTAACCAATGGTCTTGGTTTAAAATGTTTAGGCGAAATAGTTGCTGCTGATAAAAAAAAGACAGTAGTTCAATTGTCTGCTTTTGAACAAATGCCTTCACCCAATCCTCAAAACAGTATTGCTATTTCTTTTGTAAAAAATGCAGCTAGAATGGAGTGGTTTCTAGAGAAAGCTACTGAAATTGGCATAAGTGCTTTCTATCCCTTGATTGCCGATAGAACAGAGCGGACTCATTTTAAAAAAGAACGATGGGAACAAATTTTGGTATCGGCTATGTTGCAAAGTCAACAAACGTATAAGCCTGTTTTACACGACCCTATTCAGTTTAAACAACTGATTCAACAACCGCATAATGGCCAACTACTTTTAGCACATTGTGAGCCTGGCGAGAAAAAATCCATTCAATCGATTGACCAGTCTGTAAATACTTTGTTGCTCATTGGTCCAGAGGGGGATTTTACCCCAAGCGAAATTGAAATGGCCGCTAAAGCTGGGGCTTCCATGATTGGTTTAGGAAATACTCGACTCAGAACTGAAACTGCTGGAATTGCAGCTGCTGTGCTTTTACAACATAGATAA
PROTEIN sequence
Length: 234
MSIPFFYEALLPPNPGLFTLSEESSKHCSIVLRMKTGSIIALTNGLGLKCLGEIVAADKKKTVVQLSAFEQMPSPNPQNSIAISFVKNAARMEWFLEKATEIGISAFYPLIADRTERTHFKKERWEQILVSAMLQSQQTYKPVLHDPIQFKQLIQQPHNGQLLLAHCEPGEKKSIQSIDQSVNTLLLIGPEGDFTPSEIEMAAKAGASMIGLGNTRLRTETAGIAAAVLLQHR*