ggKbase home page

FFSP_062018_mid_0_1um_scaffold_1656_6

Organism: FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 2
Location: comp(6193..6486)

Top 3 Functional Annotations

Value Algorithm Source
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 97.0
  • Bit_score: 158
  • Evalue 7.70e-37
3-isopropylmalate dehydratase small subunit n=1 Tax=Thiobacillus thioparus RepID=UPI000369A35E similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 97.0
  • Bit_score: 172
  • Evalue 1.80e-40
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 97.0
  • Bit_score: 180
  • Evalue 9.30e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
TTCTTCAACAACTGTTTCAAGAACGGCATTCTGCCCATCGTGCTGGATGCTGCCATCGTGGATCAACTGTTCAGGGAATGCGAGGCCAGCGAGGGTTATGTGCTGACGGTCGATCTGGGCAAGCAGACCGTCGTCACACCGACCGGTGAAAGCATTCCGTTCGAAGTGGATGCGGGACGCAAGCATCGCTTGTTCAATGGTTTGGACGACATCGGCTTGACGCTGTTGCAAGCAGACAAAATTGCGACTTATGAAGCCCGGCGCAAACTCGAAGCGCCCTGGCTGTTTGCTTAA
PROTEIN sequence
Length: 98
FFNNCFKNGILPIVLDAAIVDQLFRECEASEGYVLTVDLGKQTVVTPTGESIPFEVDAGRKHRLFNGLDDIGLTLLQADKIATYEARRKLEAPWLFA*