ggKbase home page

FFSP_062018_mid_0_1um_scaffold_5813_1

Organism: FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 2
Location: comp(1..573)

Top 3 Functional Annotations

Value Algorithm Source
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] id=12493059 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 171.0
  • Bit_score: 306
  • Evalue 1.20e-80
shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 171.0
  • Bit_score: 287
  • Evalue 1.60e-75
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 171.0
  • Bit_score: 319
  • Evalue 1.90e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
GTGACGGCGTCCCTGCTTGCCATCCCTGCTGCCGGGCCGGTCGTCCATTACAATGCCGCCATGAGCAAGCAAGACAATCTTTATCTCGTGGGTCTGATGGGCGCGGGCAAGACCACGGTCGGCCGCTTGCTGGCCAAGCATTACGGGTGCGAATTTTTCGATTCGGACCATGAAATCGAGGCGCACACGGGCGTCAAGATTCCGGTCATCTTTGAAATCGAGGGGGAAGCCGGTTTCCGCAAGCGCGAAGAGGCCGCAGTTGCCGAGCTGACCGCCTTGTCGGGCGTGGTGCTGGCCACGGGGGGCGGAGCCATTCTGTCGCCCAACAACCGCGACAGGCTGCGTAAAAACGGCGTAGTGATTTATCTGCGTGGTACGCCCGAGCACTTGCACGAACGAACCCGCCACGACCGTAGCCGGCCGCTGCTGCAAACGGCCGATCCGCTGGCCCGGTTGCGCGATCTCTACGCCCAGCGCGACCCGCTGTACCGCGAAATTGCCGACATCGTTGTGGATACGGGGCGGCAGAGCGTGTCGGGCATGTTGCGCGTGCTGTACGGCAAGCTGGATTTG
PROTEIN sequence
Length: 191
VTASLLAIPAAGPVVHYNAAMSKQDNLYLVGLMGAGKTTVGRLLAKHYGCEFFDSDHEIEAHTGVKIPVIFEIEGEAGFRKREEAAVAELTALSGVVLATGGGAILSPNNRDRLRKNGVVIYLRGTPEHLHERTRHDRSRPLLQTADPLARLRDLYAQRDPLYREIADIVVDTGRQSVSGMLRVLYGKLDL