ggKbase home page

FFSP_062018_mid_0_1um_scaffold_1562_6

Organism: FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 2
Location: comp(4694..5416)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 240.0
  • Bit_score: 352
  • Evalue 6.80e-95
Pseudouridine synthase id=1362740 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 240.0
  • Bit_score: 380
  • Evalue 1.10e-102
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 240.0
  • Bit_score: 466
  • Evalue 1.20e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGTGGCTGGCGCGCGCGTTGCAATCACAGGGGTTCGGTTCACGCAAAGGCTGCGTGTTGCGGGTACGTTCGGGTGCTGTCTCGATCAACGGCGTGGTCGTCGATGACCCGGAGCACGAGGTTGACCCGGTCGGACTGGAACTGACGATCGACGGCGTGACCTGGCCGTATCATGAAAAAGCCTATGTTTTGATGCACAAACCGGCTGGATACGAGTGCTCGCACAAACCCAAACACCATCCCAGCGTGTTTTCCCTGTTGCCGGCGCCCTTCATCGAGCGTGATCTGCAATGCGTGGGGCGACTCGACCAGGACACCACCGGTTTGCTGCTGTTATCCGACGATGGCCAGTTTATTCACCGCATGACGTCGCCGAAAAAAGGCGTGGCCAAGGTGTATCGCGCCACCTGCGCCGATCCGGTGGATTCGGCGATGCTGGATGCCTTGCGCAGCGGCGTACTGCTCAACGACGAACCCGCGCCGATTGCTGCGCTGACGTGCGAGGCGATCGATGGACATAGCCTGCAACTGACCCTGGCCGAGGGCAAATACCATCAGGTCAAGCGCATGATCGGCGCTACCGGAAACCGGGTAGACAAGCTGCATCGCGTTGCGATTGGCGATTTTGTCCTGCCTGAAACGCTCGCCCCCGGCAGCTGGTGCTGGCTGGAGGCCGCTGATTTACTGCAACTGGAGCAGCCATGGCGATCCGTGAAGTCCTGA
PROTEIN sequence
Length: 241
MWLARALQSQGFGSRKGCVLRVRSGAVSINGVVVDDPEHEVDPVGLELTIDGVTWPYHEKAYVLMHKPAGYECSHKPKHHPSVFSLLPAPFIERDLQCVGRLDQDTTGLLLLSDDGQFIHRMTSPKKGVAKVYRATCADPVDSAMLDALRSGVLLNDEPAPIAALTCEAIDGHSLQLTLAEGKYHQVKRMIGATGNRVDKLHRVAIGDFVLPETLAPGSWCWLEAADLLQLEQPWRSVKS*