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FFSP_062018_mid_0_1um_scaffold_7494_4

Organism: FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 2
Location: comp(1426..1713)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 96.0
  • Bit_score: 166
  • Evalue 2.10e-39
Pseudouridine synthase id=1342847 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 91.0
  • Bit_score: 167
  • Evalue 4.40e-39
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 95.0
  • Bit_score: 189
  • Evalue 2.00e-45

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
GAGTCGTTTGCCGATTTCACCCTGCTGGAAGCGGAACTTAAAACCGGTCGCACCCACCAGATCCGCGTGCATACCTCGCACCTGGGGTTCCCGATTGCGGGCGATGATAAATATGGCGACTTCGAGTTGAATAAAACGTTGGCCAAACAGGGTCTCAAGCGGATGTTTTTGCACGCTGCCAAGCTGTCGTTCGCCCATCCGGTGACGGGTGAGCGTTTGTTGATCGAGGCACCCTTGCCTGCAGATCTTTCACCTTTTCTGGATTCGCTTCATGCCCAAGCACTTTGA
PROTEIN sequence
Length: 96
ESFADFTLLEAELKTGRTHQIRVHTSHLGFPIAGDDKYGDFELNKTLAKQGLKRMFLHAAKLSFAHPVTGERLLIEAPLPADLSPFLDSLHAQAL*