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FFSP_062018_mid_0_1um_scaffold_3353_2

Organism: FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 2
Location: comp(965..1648)

Top 3 Functional Annotations

Value Algorithm Source
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator id=12495115 bin=THIO_HI species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 227.0
  • Bit_score: 370
  • Evalue 8.10e-100
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EIJ33161.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 225.0
  • Bit_score: 308
  • Evalue 5.30e-81
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 221.0
  • Bit_score: 300
  • Evalue 3.80e-79

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGAAACTCCTGGTGATCGAAGACGACATCGAAGCGGCGACCTATCTGCGGCGTGGGCTGAGCGAATCCGGCCATGTGGTCGATTGCGCGCACGACGGCGAAACCGGCTTGCAGCTCGCGCTGCAAAATCCCTATGACGCGCTGATCGTCGACCGCATGCTGCCGCGCCGCGACGGCCTGTCGCTGATTCGCATGCTGCGCGCCGATGGCCGCATGACGCCGGTGCTGGTGCTGTCTGCGCTCGGCCAGGTCGATCAGCGCGTCGAGGGGCTGCGCGCGGGCGGCGACGACTATCTGGTCAAGCCGTATGCGTTTGCCGAACTGCTCGCGCGCATCGACGCCCTGGCGCGGCGCGCGGCGCCCGCCGTTCCGGACACGCCGGGCGTGCTCAAGGTCGCCGACCTCGAACTCGATCTGGAACGCCGCCGCGTCAGCCGCGCCGGGCAGTTGATCCGGCTGCAGCCGCGCGAACTGCGCCTGCTCGAATACCTGATGCGGCGCGCCGGACGCATCGTGACGCGGACGATGCTGCTGGAACAGGTGTGGGATTTGCACTTCGACCCGCAGACCAATGTGGTGGACAGCCAGATCAGCCGTCTGCGCGCGAAGATCGACCGCGATTTCGACACGCCGCTGCTGCACACCCTGCGCGGCATCGGTTACCGGCTGGGCGAAGAGGCGTGA
PROTEIN sequence
Length: 228
MKLLVIEDDIEAATYLRRGLSESGHVVDCAHDGETGLQLALQNPYDALIVDRMLPRRDGLSLIRMLRADGRMTPVLVLSALGQVDQRVEGLRAGGDDYLVKPYAFAELLARIDALARRAAPAVPDTPGVLKVADLELDLERRRVSRAGQLIRLQPRELRLLEYLMRRAGRIVTRTMLLEQVWDLHFDPQTNVVDSQISRLRAKIDRDFDTPLLHTLRGIGYRLGEEA*