ggKbase home page

FFSP_062018_mid_0_1um_scaffold_13852_2

Organism: FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 2
Location: 452..1030

Top 3 Functional Annotations

Value Algorithm Source
periplasmic protein TonB; K03832 periplasmic protein TonB id=12495092 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 197.0
  • Bit_score: 210
  • Evalue 1.20e-51
periplasmic protein TonB similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 208.0
  • Bit_score: 149
  • Evalue 5.40e-34
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 193.0
  • Bit_score: 298
  • Evalue 6.10e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGACGTCCTCGTTGAGCGCCCCCTCCATTCTTGAAAACAGCAGCGCATCCCCTGCGGGCCTGCGCGCCGCCTCGCTGCTGGATTCGCCGCGCCTGTCGCGCACCTCCCTTGCCGCCGTGGCGCTGGCGCACGCCGCTGTGCTCGCGGCGCTGTTGCTCTCCACCACCGCCGTGCCCAAGCCGGTCACGCCGCCGCGCCCGCTGACCGTCAGCCTGATCGTCCCGGAAATCGAAACGCCCCAGGTCAAGCCTGCTCCCACGCCAGCCAGGGCCGTGGTCAAGCCCTTGACGCCGCCTCCCGTGCTGGCCATCCGGCGCCCGCTGCCGACGCCGCAAACCGTTGAAAAGGCGCCTGAACCCGCGCCCCAACCCGAGCCCGTACGCGCACTTCTGCCGCAGCCGGCGCCGGAGGTGGCAACAGCCCCCCCGGCTGCGCCTGCACCGCTGCCCACGCCGTCGCCACCGCGCGCGGCGGATTACCTGAACAACCCCAAACCCCCCTACCCCGCACTGTCCAGGCGTCTGGGCGAGGTGGGCACCGTCCGCCTCTCGATTCTGGTCAATGCCGACGGCAGCGTT
PROTEIN sequence
Length: 193
MTSSLSAPSILENSSASPAGLRAASLLDSPRLSRTSLAAVALAHAAVLAALLLSTTAVPKPVTPPRPLTVSLIVPEIETPQVKPAPTPARAVVKPLTPPPVLAIRRPLPTPQTVEKAPEPAPQPEPVRALLPQPAPEVATAPPAAPAPLPTPSPPRAADYLNNPKPPYPALSRRLGEVGTVRLSILVNADGSV