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FFSP_062018_mid_0_1um_scaffold_12940_3

Organism: FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 2
Location: comp(766..1089)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=12498202 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 104.0
  • Bit_score: 183
  • Evalue 6.60e-44
RND efflux transporter similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 104.0
  • Bit_score: 174
  • Evalue 1.10e-41
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 104.0
  • Bit_score: 180
  • Evalue 7.90e-43

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
AAAAACGGCATCATGATGATCGACTTCGCGCTGACCCGGCAGCGCGCCGGCATGAGCGCCGAGGACGCCATCGTCGAGGCCAGCCTGGTGCGCCTGCGCCCGATCATGATGACTACCTTCGCCGCCATCGTCGCCACGCTGCCGATCGCCATCGGCTTCGGCACGGGCGGCGAGGCGCGGCGTCCGCTCGGCATCGCCGTGGTCGGCGGCCTGTTGTTCTCGCAGTTCCTCACGCTCTACATCACGCCGACGTTCTACGTCAGCATGGCGCAGTTCGAGGCCTGGCTGGGGCGCCAGCGCGCGCGCTTCGCCGGGGTGACGTAA
PROTEIN sequence
Length: 108
KNGIMMIDFALTRQRAGMSAEDAIVEASLVRLRPIMMTTFAAIVATLPIAIGFGTGGEARRPLGIAVVGGLLFSQFLTLYITPTFYVSMAQFEAWLGRQRARFAGVT*