ggKbase home page

FFSP_062018_mid_0_1um_scaffold_6893_1

Organism: FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 2
Location: comp(1..711)

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000369EEF4 similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 237.0
  • Bit_score: 369
  • Evalue 1.90e-99
RND efflux system outer membrane lipoprotein NodT similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 241.0
  • Bit_score: 342
  • Evalue 7.00e-92
RND efflux system outer membrane lipoprotein NodT {ECO:0000313|EMBL:AAZ97369.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 241.0
  • Bit_score: 342
  • Evalue 3.50e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGAGCCCGCTCCGCACCCTGAGCATCGTGCTCGCCGCCAGCCTGACCGGCGCCTGCACCCTGATGCCCGACTATCAGCGACCGGCGGCGCCGGTGCCGACCGCTTTTCCGCAAGCTGCGCCCGCAGCGGCGGCCACGCCGGCCGACGCCATCGCCTGGCGCGACTATTTCGCCGATGCACAGCTGCGCGAGGTGATCGCGCTGGCGCTGGCCAACAACCGTGACCTGCGCATCGCCGCGCTCAATATCGAAAAGGCGCGCGCCCAATACGGCATCCAGCGCGCCGACCTGTTTCCGGCTGTCGGCGCCAGCGGCGGGCAAACCGCGCAGCGCCTGCCGGGCGACCTCACCGCCAGCGGCAACGCCGAGATCAATCGCCAGTACAGCGCAACGATTGGCTTTTCCGCTTACGAACTCGATTTCTTCGGCCGCATCCGCAGCCTCAATGCAGCGTCGCTCGAAACCTACCTCGGCACCGAAGAAGCGCGCCGCAGCGCGCAGATCAGCCTGGTGGCCGAAGTCGCCAACGTCTGGCTGACGCTGGGCGCCGACCGTGAACGGCTGGCGCTGGCGCGCAGCACTTATGAGACGCGGCTGAAGTCGCGCGACCTGATCCGCCGTAGCGCCGAAGAAGGCGCCGTTTCGGCGCTCGAATACAACCAGTCGCAGACGCTGCTGCAAGGCGCGCGTGCCGACGTGGCACGTTTCACC
PROTEIN sequence
Length: 237
MSPLRTLSIVLAASLTGACTLMPDYQRPAAPVPTAFPQAAPAAAATPADAIAWRDYFADAQLREVIALALANNRDLRIAALNIEKARAQYGIQRADLFPAVGASGGQTAQRLPGDLTASGNAEINRQYSATIGFSAYELDFFGRIRSLNAASLETYLGTEEARRSAQISLVAEVANVWLTLGADRERLALARSTYETRLKSRDLIRRSAEEGAVSALEYNQSQTLLQGARADVARFT