ggKbase home page

FFSP_062018_mid_0_1um_scaffold_1808_2

Organism: FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 2
Location: comp(397..633)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RL28_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 78.0
  • Bit_score: 144
  • Evalue 4.20e-32
rpmB; 50S ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 78.0
  • Bit_score: 144
  • Evalue 1.20e-32
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 78.0
  • Bit_score: 156
  • Evalue 8.90e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGGCTCGCGTATGTGTCGTAACGGGCAAGAAGCCCATGGTTGGAAACAACGTTTCCCACGCCAACAATAGAACCAAGCGTCGTTTCCTGCCGAACCTGCAACAGCACCGGTTCTGGGTCGAGGCTGAAAATCGCTGGGTTCGCTTGCGTCTTTCCACTGCTGCATTGCGCACCATCGACAAGAACGGCATTGAATCTGTCCTCGCTGACCTGCGCGCCAACGGCGTTTCGGTCTAA
PROTEIN sequence
Length: 79
MARVCVVTGKKPMVGNNVSHANNRTKRRFLPNLQQHRFWVEAENRWVRLRLSTAALRTIDKNGIESVLADLRANGVSV*