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RTP_092018_0_1um_scaffold_7555_11

Organism: RTP_092018_0_1um_bin_28_55_57_0_85

partial RP 21 / 55 BSCG 25 / 51 MC: 2 ASCG 7 / 38
Location: comp(7459..7704)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq; K03666 host factor-I protein id=12493081 bin=THIO_HI species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 81.0
  • Bit_score: 156
  • Evalue 6.60e-36
RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 79.0
  • Bit_score: 150
  • Evalue 1.70e-34
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 159
  • Evalue 1.10e-36

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGGCCAGCAAAGAATACAACCACCTGCAAGACGTTTTCCTCAACACCCTGCGCAAGGAACGCATCCCGGTTTCAGTGTTTCTCGTGAACGGGATCAAGCTCATGGGGCGAATCGAATCGTTCGACCAGTTTGTGGTGCTGCTGAAAGGTCAGGATCAGGCCGCCCAGATGATCTTCAAGCACGCCATCTCGACCATTTCGCCTTCGCGCGAAGTGGTACTGCCGCAACGCGACCCCGAGGCCTGA
PROTEIN sequence
Length: 82
MASKEYNHLQDVFLNTLRKERIPVSVFLVNGIKLMGRIESFDQFVVLLKGQDQAAQMIFKHAISTISPSREVVLPQRDPEA*