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RTP_092018_0_1um_scaffold_12511_3

Organism: RTP_092018_0_1um_bin_28_55_57_0_85

partial RP 21 / 55 BSCG 25 / 51 MC: 2 ASCG 7 / 38
Location: comp(1166..2830)

Top 3 Functional Annotations

Value Algorithm Source
general secretion pathway protein D; K12282 MSHA biogenesis protein MshL id=12493312 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 554.0
  • Bit_score: 1012
  • Evalue 9.90e-293
general secretion pathway protein D similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 558.0
  • Bit_score: 870
  • Evalue 2.30e-250
General secretion pathway protein D {ECO:0000313|EMBL:AAZ96717.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 558.0
  • Bit_score: 870
  • Evalue 1.10e-249

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1665
ATGATGAAGCGCTACACCATGATCGTTGTCGGTCCGCTGGTTCTGCTGGGATGCGCAGGCCCCCTGACGCCGCGCGATGCGCAGCAGGCGATCCGTCAGGAAATTGCCCAGGCGGCCCAGGCGCAGCCCGCGCCGCACGCGATGACAGACGCACAGGCCCAGGCTGCGCTGCTGCCCCCGCTCAAGCTGGAACTGCCCAAGGGCGCGGCGGAGCCGGCCGAGCCGCGTTTCGACCTGGTCGTCAACGGTGCGCCTGCGCAGGACGTGTTCATGGCGATCGTCTCCGGCACGCGCTACAGCATGCTGGTGCATCCCGAGGTGGCGGGCACGATTTCCGCCAACCTCAAGAACGTCACCGTGCCCGAGGCGATGTCCGCCATACGCGAACTGTACGGTTACGACTACACGATGGAAGGGCACCGCATCGTGGTACGGCCGCTGACGCCGCAGACCCGCATCTTCAAGGTGAACTACTTGGCAGGGACCCGCACCGGTTCGTCGGACATGCGCGTGATTTCCGGATCCGTCAGTTCCAAGGGCACCGGCGGCACGAGCGGCGTAACCGGAGGTGGCTCCACGCAACAGTCGCTGGAAACCAGCAGGATCGACACGAAGCTCAATTCGGACTTCTGGGGCGAATTGAAGATGGCGCTGGACACCATCGTCGGCGAATCCGGCAAGGTGATCCTCAGCCCGCAGTCGGGCATCGTGGTGGTCAGGACCACGCCGCGCACCATGCGGGATGTCGAGCACTTCCTCAAGGCCACCGCCTCGGCGGTCGAACGTCAGGTCATGCTGGAGGCGAAAATACTCGAGGTACAGTTGAACGACGGCTATCAGACCGGCATCAACTGGTCAGTGCTACACAACGGCCAGCATAAATACTCCTCGGGCGCCAATACCGGCAATTTCGATTTATTGACAGGCGCCGCCAGCGGCTCGCTGGCGGATGTGCTCGGCAGCGGGTTGCCCGCGGCGGCCGGTACGTCGTCCGGTATCTTCGGCCTTGCGTTCCAGACCAAGAGCTTTGCTGCGTTGATCAATTTCCTCGAAACCCAGGGATCGGTGCATGTGCTGTCCAGCCCGCGCATCGCGGCACTGAACAACCAGCAGGCCGTACTCAAGGTCGGCACCGACGATTTCTTCGTCACCGACGTCTCGACCACCAGCAATACCGGCGGTGCGGGCACCACGACCACGCCCAGCGTGACACTGCAGCCCTTCTTCTCGGGCATCGCGCTCGATGTCACGCCGCAGATCGACGAAAAGGGCCGCATCACGCTGCACATCCGTCCCTCGGTGAGCGTGGTGACGGAGAAGATCAAGAACATCGACGCCGGCCAGGCCGGAAAACTGACGCTGCCGCTTGCGTCCAGCGCGGTCTCGGAAACGGACAGTGTCGTGCAGGTGGAGGATGGCCGTATCGTCGCCATCGGCGGAATGATGAAGCAATCCTTCGACGGTAGCGCCAACCGTGTGCCCGGGCTGGGCCAGGTGCCGCTGTTGGGGTACTTCTTCGGCAATACCAACCAGAGTTCGAAGAAGAGCGAACTGGTGATCCTCATCAAGCCGACCGTCATCGATCGCCAGGAAGATTGGCAGGCGGATGCGGAAGCGACCCAGGCACGCCTCGACAAACTCGAGCGACAACCGGCGACACCATGA
PROTEIN sequence
Length: 555
MMKRYTMIVVGPLVLLGCAGPLTPRDAQQAIRQEIAQAAQAQPAPHAMTDAQAQAALLPPLKLELPKGAAEPAEPRFDLVVNGAPAQDVFMAIVSGTRYSMLVHPEVAGTISANLKNVTVPEAMSAIRELYGYDYTMEGHRIVVRPLTPQTRIFKVNYLAGTRTGSSDMRVISGSVSSKGTGGTSGVTGGGSTQQSLETSRIDTKLNSDFWGELKMALDTIVGESGKVILSPQSGIVVVRTTPRTMRDVEHFLKATASAVERQVMLEAKILEVQLNDGYQTGINWSVLHNGQHKYSSGANTGNFDLLTGAASGSLADVLGSGLPAAAGTSSGIFGLAFQTKSFAALINFLETQGSVHVLSSPRIAALNNQQAVLKVGTDDFFVTDVSTTSNTGGAGTTTTPSVTLQPFFSGIALDVTPQIDEKGRITLHIRPSVSVVTEKIKNIDAGQAGKLTLPLASSAVSETDSVVQVEDGRIVAIGGMMKQSFDGSANRVPGLGQVPLLGYFFGNTNQSSKKSELVILIKPTVIDRQEDWQADAEATQARLDKLERQPATP*