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RTP_092018_0_1um_scaffold_15906_5

Organism: RTP_092018_0_1um_bin_28_55_57_0_85

partial RP 21 / 55 BSCG 25 / 51 MC: 2 ASCG 7 / 38
Location: 3230..3979

Top 3 Functional Annotations

Value Algorithm Source
type II secretory protein GspE n=1 Tax=Thiobacillus thioparus RepID=UPI00036CA70B similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 250.0
  • Bit_score: 489
  • Evalue 1.70e-135
type IV pilus assembly protein, PilB similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 250.0
  • Bit_score: 449
  • Evalue 5.60e-124
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 250.0
  • Bit_score: 466
  • Evalue 1.70e-128

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGGCAGCTGTGACAAACACCAACAATTTAACCGGACTGGCGCGTGCCATGGTCAACCATGGCTGGCTGTCCGAGGACGACGCCGAAGGCGTCTGGAAACGTGCCAGCCAATCGGGCGATTCGTTCGTGACCGAATTGATCAAAGGGCGGCGGTTCAAGTCTGATCAGGTTGCCGAGTTTGCGGCTGCCTCGTTCGGTTTCCCCTACCTGGACCTGAATGCCATGGATCATGAAAGCCTGCCGCAAGGGCTGCTCGATCCGAAATTGGTGCAGAAACGGCGGGTGTTTGCCTTGTATCAGCGGGGCAACAAGCTGTATGTGGCGACGTCCGACCCCACGCATCTGCAGGCGCTGGACGAGGTGAAATTCCAGACCGGGCAGGCGGTGGAACCGGTGGTGGTGGAGGACGACAAGCTCGGCAAGCTGATCGAGAAGATGGGCGAAGCGAACGACAACACGATGGCTGTGTTGAACGCCGAAGACCTCAATCTGGATTTCCTCGACGAAGAAAGCGCAGCGGCTGCGCAACAGGATACCGGCGGCATCGAAATCGACGATGCACCGGTGGTGCGCTATCTGCAAAAGATCATGCTCGATGCCATCAACATCGGCGCATCCGACATTCACTTCGAACCGTACGAGAAGTTTTATCGCATCCGCTATCGGCGTGACGGCATCCTGGCCGAAGTGGCACAACCGCCGATGGCGATCAAGGACAAGGTCGCATCGCGTATCAAAGTGCTGTCGCGA
PROTEIN sequence
Length: 250
MAAVTNTNNLTGLARAMVNHGWLSEDDAEGVWKRASQSGDSFVTELIKGRRFKSDQVAEFAAASFGFPYLDLNAMDHESLPQGLLDPKLVQKRRVFALYQRGNKLYVATSDPTHLQALDEVKFQTGQAVEPVVVEDDKLGKLIEKMGEANDNTMAVLNAEDLNLDFLDEESAAAAQQDTGGIEIDDAPVVRYLQKIMLDAINIGASDIHFEPYEKFYRIRYRRDGILAEVAQPPMAIKDKVASRIKVLSR