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RTP_092018_0_1um_scaffold_602

Search features with annotation key words

Displaying items 61-90 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_092018_0_1um_scaffold_602_57
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49561..50499)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037949D1
lauroyl/myristoyl acyltransferase
Putative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis {ECO:0000313|EMBL:AAZ98701.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_602_58
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50496..50816)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFB4_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_59
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50813..52174)
DNA (1362bp) protein (454aa)
CoA ligase id=12493253 bin=THIO_HI species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
CoA ligase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_60
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52198..52872)
DNA (675bp) protein (225aa)
Transmembrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SER4_THIDA
transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_61
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52883..53182)
DNA (300bp) protein (100aa)
acyl carrier protein; K02078 acyl carrier protein id=12493251 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
acyl carrier protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_62
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53275..53877)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFB6_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98696.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_602_63
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54043..54255
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=1 Tax=Thiobacillus denitrificans RepID=UPI000360CC15
rpsU; 30S ribosomal protein S21
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_64
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54287..54733
DNA (447bp) protein (149aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Thiobacillus thioparus RepID=UPI00036783EB
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_65
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54786..56486
DNA (1701bp) protein (567aa)
DNA primase (EC:2.7.7.-)
DNA primase id=1320210 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_66
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56600..58543
DNA (1944bp) protein (648aa)
RNA polymerase sigma factor id=1320209 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
carbamoyl-phosphate synthase L chain, ATP-binding
Tax=GWE1_Thiobacillus_62_9_curated
RTP_092018_0_1um_scaffold_602_trna_1
unknown

Not on your lists

58582..58655
DNA (74bp)
transferRNA Met
RTP_092018_0_1um_scaffold_602_67
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58836..59288
DNA (453bp) protein (151aa)
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B6E16
methylated-DNA-(protein)-cysteine S-methyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_68
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59263..60171
DNA (909bp) protein (303aa)
tyrosine recombinase XerD n=1 Tax=Thiobacillus thioparus RepID=UPI000380E9BF
tyrosine recombinase XerD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_69
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60175..61146)
DNA (972bp) protein (324aa)
Putative succinylglutamate desuccinylase id=1320218 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
succinylglutamate desuccinylase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_602_70
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61143..61895)
DNA (753bp) protein (251aa)
Putative uncharacterized protein id=1320217 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_71
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61892..62254)
DNA (363bp) protein (121aa)
dienelactone hydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI00037233CF
dihydroneopterin aldolase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_72
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62305..62907
DNA (603bp) protein (201aa)
Glycerol-3-phosphate acyltransferase id=1320215 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
acyl-phosphate glycerol-3-phosphate acyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_73
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62926..63726
DNA (801bp) protein (267aa)
Putative uncharacterized protein id=1320214 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_74
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63785..64174
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJK6_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_75
Acinetobacter sp. ANC 3862, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64370..64990
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. ANC 3862 RepID=N9LTU7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENW99752.1}; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3862.;"
hypothetical protein
RTP_092018_0_1um_scaffold_602_76
unknown

Not on your lists

65069..65413
DNA (345bp) protein (115aa)

This feature has no annotations

RTP_092018_0_1um_scaffold_602_77
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(65991..66995)
DNA (1005bp) protein (335aa)
o-sialoglycoprotein endopeptidase (EC:3.4.24.57)
UGMP family protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036156D1
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_78
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67220..68554
DNA (1335bp) protein (445aa)
Oxidoreductase, FAD-binding, putative n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF98_THIDA
oxidoreductase, FAD-binding
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_79
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68551..69576
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF99_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98715.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_602_80
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69573..70406
DNA (834bp) protein (278aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFA1_THIDA
phospholipid/glycerol acyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_81
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70399..71172
DNA (774bp) protein (258aa)
glycosyl transferase family protein id=12493264 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glycosyl transferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_82
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71210..71833
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWX4_RAMTT
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_83
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71925..72692
DNA (768bp) protein (256aa)
demethylmenaquinone methyltransferase (EC:2.1.1.-)
Methyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFA3_THIDA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_84
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73071..73430)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4GAF5_HERAR
signal peptide
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_602_85
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73761..74192)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000318C35D
Uncharacterized protein {ECO:0000313|EMBL:KJB97323.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
Displaying items 61-90 of 114 in total

View Taxonomy