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RTP_092018_0_1um_scaffold_928_4

Organism: RTP_092018_0_1um_Hydrogenophilales_62_10

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(2337..3992)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378B863 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 551.0
  • Bit_score: 880
  • Evalue 5.90e-253
DNA repair protein RecN similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 551.0
  • Bit_score: 822
  • Evalue 4.10e-236
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 551.0
  • Bit_score: 822
  • Evalue 2.00e-235

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1656
ATGCTGTCGCATCTCTCCATCCATAATTACTTGTTGGTCGAATCGGTCGAACTCGATTTCGCGCCGGGTCTGACCGTGCTCACCGGCGAAACCGGGGCGGGCAAGTCCATTCTGGTCGATGCCCTGGCGCTGGCGCTGGGTGATCGCGCCGAGGGCGGGGTGGTGCGCCAGGGCGCTGCGCGCGCCGAAATCGCCGCCGAATTCGTGATTGATGGCTTGCATCAGCTGGCACGCTGGCTCGACGATGCAGGCTTTTCCGCAGACGATGGCACGCTGATTTTGCGGCGGGTAATCGAATCTGGCGGCCGCTCGCGTGCCTTCATCAACGGCAGCGCCGCACCGCTCGCCCAGCTGAAGGAAGCCGCCGAGTTTTTGCTCGACATTCACGGCCAGCATGCCCATCACGCCCTGCTGCGCGCGTCCACCCAGCGCGAGGTGCTCGACGCCTATGCCGGCGCGCAGCAAACCGCCGCCACTGTCAGCAGCGCCTGGCACGCCTGGCAAGGCGCGCGCCAGCGGCGGCTCGACGCCGAATCCAGCGGCCAGGCGCGGCAGATCGAACGTGAAGGCCTGCAGTTGGCGGTGGAAGAATTGCGCGCACTGGGCGACGACCTCGCGCGCTGGGACGACATTCAAACCGAGCACGCCCGGCTGTCGCATGTCACCACCCTGATCGAAGGCATTCAGGCGCTGATCGCCGGGCTGGACGAAGACGAGTCCGCCGTCTCCAGCCAGCTCGGCGAACTGGGTGCGCGGCTCGATGCCATGCAAGCGGTGGACGACAGCCTGAAGGACGTGGCCACGCTGCTGCATTCGGCCAGCGCCGATCTCGCCGAGGCCGTGCATGCGCTGCGCCGCTATTCCAATCAACTGAATCTCGACCCGCAGCGGCTCGACGAACTCGACCGTTTGTTGAGCGACATGCACCGGCTGGCGCGCAAGCATCGCGTGCAGCCCGACGCGCTGGCCGGGCTGCTCGAACAGTTCGAGACAAGACAGGCTGAATTGGCCGCCAGCGACGATCTTGACGCCCTGCAAGCCAGCGAAGCAGCCGCCATGGCGCACTACCAGCATGCAGCCACGCAGCTCAGCGCGCAGCGCAGCAAGGCCGCCAAGGCCTTATCGAAACAGGTGACCGCCGCGATGCATGAGCTGGCGCTGGCCGGCGGCCGGCTCGACATTCAGCTGCAGCCGGTGAGCGAGCCGCGCGCTCATGGCCTCGAAGACGTCGGCTTCCTTGTCGCCAGCCACACCGGCCTGCCGCCGGGACCACTGGCCAAAGTGGCGTCGGGCGGCGAACTGTCGCGCATCAGCCTGGCGATCCAGACCGCGCTATCCGGCGTGGCTGGCGTGCCCACGCTGATATTCGACGAAGTCGATGTCGGCATCGGCGGCAGCGTCGCCGAAGCCGTGGGGCGGCGCCTGGCCAGGCTTGGCGAAACGCGTCAGGTGCTGGTCATCACCCACCTGCCGCAAGTCGCCGCTCGCGGCAGCCAGCATTTGCGCGTCGCCAAGCAGGCCAACGGCGGCTTCGTGTCGTCCAACATCGAATTGCTCGACGCCGACGCGCGGGTGGAAGAACTCGCCCGCATGCTGGGCGGCATCAAGATCACCGCCACCACCCGCCAGCATGCAGCGGAGATGCTTGCCGGGTGA
PROTEIN sequence
Length: 552
MLSHLSIHNYLLVESVELDFAPGLTVLTGETGAGKSILVDALALALGDRAEGGVVRQGAARAEIAAEFVIDGLHQLARWLDDAGFSADDGTLILRRVIESGGRSRAFINGSAAPLAQLKEAAEFLLDIHGQHAHHALLRASTQREVLDAYAGAQQTAATVSSAWHAWQGARQRRLDAESSGQARQIEREGLQLAVEELRALGDDLARWDDIQTEHARLSHVTTLIEGIQALIAGLDEDESAVSSQLGELGARLDAMQAVDDSLKDVATLLHSASADLAEAVHALRRYSNQLNLDPQRLDELDRLLSDMHRLARKHRVQPDALAGLLEQFETRQAELAASDDLDALQASEAAAMAHYQHAATQLSAQRSKAAKALSKQVTAAMHELALAGGRLDIQLQPVSEPRAHGLEDVGFLVASHTGLPPGPLAKVASGGELSRISLAIQTALSGVAGVPTLIFDEVDVGIGGSVAEAVGRRLARLGETRQVLVITHLPQVAARGSQHLRVAKQANGGFVSSNIELLDADARVEELARMLGGIKITATTRQHAAEMLAG*