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FFSP_072018_bottom_0_1um_scaffold_657_4

Organism: FFSP_072018_bottom_0_1um_Hydrogenophilales_64_54

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(2385..3362)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 313.0
  • Bit_score: 576
  • Evalue 3.90e-162
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 313.0
  • Bit_score: 576
  • Evalue 2.00e-161
ribosomal large subunit pseudouridine synthase D n=1 Tax=Thiobacillus thioparus RepID=UPI000364D88F similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 323.0
  • Bit_score: 608
  • Evalue 2.50e-171

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGGACAAAGACACAGAAAATTCGTCGGGTGATTATAAGGGAAATACGGAGGGCGACATCCGCAAGCTGGTGATCCCAGACGAGCAGGGCGGTTTGCGTCTCGATCAGGCGCTGTCCGCCTTGCTGCCCGAGTTTTCGCGCAACCGCATCCAGAACTGGATCCGCGCACGCAAGATCGCGGTGGACGATGCCTGGGGCACCACCCGGATGAAGGTCAGCGGCGGCGAGTCGGTGCGGGTCGAGATCGAGCCTGATCCGAACGCCACGCCCGATGCGCCCGAGGCCATCCCGCTCGACGTGGTGTTCGAGGATCCGATGCTGCTGGTGATCAACAAGCCGGTCGGCCTGGTGGTCCATCCCGGCAGCGGCAACCGCCACGGCACGCTGCTGAACGCGCTGCTGCACCGGGTGCCGCAGGTGGCCGAACTGCCGCGCGCCGGCATCGTGCATCGGCTCGACAAGGACACCTCCGGCCTGCTGGTCGTCGCCAAGGTCCTGAAATCGCACACCGATCTGGTGCGCCAGTTGCAGGCGCGCACCGTCAAGCGCGAATACCTCGCGCTGGTGTATGGCGAGGTCGACCACGCCGGCACGGTCGATGCGCCGCTGGCACGTGATCCGCACAACCGCGTCAAGCGCACCGTGCACACCATGGGCAAGGAAGCGGTCACGCATTACGAAGTGGTCGAGCGCTTTCCCGGCATCACCCTGCTGCGCTGCAAGCTGGAAACCGGGCGCACCCATCAGATCCGGGTGCATATGCAGCACATCGGCCATCCGCTGGTCGGCGAATCGGTTTACAGCGCCAGCCGCCGCAACCACCTCAGGATCCCGTTCCCGCGCCAGGCGCTGCACGCCGAAAGGCTGGGTCTGATCCATCCGGTCACCCAGGAATTCATGCAGTGGGAATGCCCCCTGCCGCCCGATTTCGCCTCGCTTCTGCACGCCCTGCGCGAAGACACCATCTGGAAAGCCTGA
PROTEIN sequence
Length: 326
MDKDTENSSGDYKGNTEGDIRKLVIPDEQGGLRLDQALSALLPEFSRNRIQNWIRARKIAVDDAWGTTRMKVSGGESVRVEIEPDPNATPDAPEAIPLDVVFEDPMLLVINKPVGLVVHPGSGNRHGTLLNALLHRVPQVAELPRAGIVHRLDKDTSGLLVVAKVLKSHTDLVRQLQARTVKREYLALVYGEVDHAGTVDAPLARDPHNRVKRTVHTMGKEAVTHYEVVERFPGITLLRCKLETGRTHQIRVHMQHIGHPLVGESVYSASRRNHLRIPFPRQALHAERLGLIHPVTQEFMQWECPLPPDFASLLHALREDTIWKA*