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FFSP_072018_mid_0_1um_scaffold_310_18

Organism: FFSP_072018_mid_0_1um_Sphingobacteria_36_79

near complete RP 45 / 55 MC: 2 BSCG 48 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: comp(27760..28071)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KU49_SOLCM similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 99.0
  • Bit_score: 115
  • Evalue 2.10e-23
Helix-turn-helix protein similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 99.0
  • Bit_score: 115
  • Evalue 6.00e-24
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 102.0
  • Bit_score: 157
  • Evalue 6.90e-36

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 312
ATGAAAAGTCAATTTGGTGAGAGGGTAAGGGAGCTCAGAGAAAAGCAAAACTTGTATTTGCGGCAGGTAGCACCATTGCTGGAAATGGATACGGCACAACTGAGTAAAATTGAAAAAGGGAGCAGATTAATTAAGAGGGAGCAGATACAAGTTTTGGCTGACATTCTGAAAGCTGATTCAAACGAGTTGCTGGTGCTTTGGTTGGCCGATCAGTTGTATGAAGTGGTCAAGGATGAAGATGTAGCACTAAAGGCTATGGATGCTGCTCAAGAAACATTGAAATCTAATAAAAGAAACAAAAGAAATAAATAA
PROTEIN sequence
Length: 104
MKSQFGERVRELREKQNLYLRQVAPLLEMDTAQLSKIEKGSRLIKREQIQVLADILKADSNELLVLWLADQLYEVVKDEDVALKAMDAAQETLKSNKRNKRNK*