ggKbase home page

FFSP_072018_mid_0_1um_scaffold_2544_2

Organism: FFSP_072018_mid_0_1um_Sphingobacteria_36_79

near complete RP 45 / 55 MC: 2 BSCG 48 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: 2183..2698

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EJ43_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 170.0
  • Bit_score: 115
  • Evalue 4.60e-23
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 170.0
  • Bit_score: 115
  • Evalue 1.30e-23
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 172.0
  • Bit_score: 300
  • Evalue 1.40e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 516
ATGCAAACAACCTTTGTTTATGCGCAATCTCTGGCCGATTTAACAGGGACGGTTCTAAATGAAAAAGGAGATCCGTTGTCAAGTGTGACGGTTTTGCTCCAAACCAAAGGAGCAGGAAATCAAACAGTAACAACCAACGAAAAAGGGAATTATACTTTTAAGCAATTAGCTATTGGCAACAAATACAATTTGACATTTTCTTATGTTGGTTTTACTCCAATTGCTCAAACAATCACTATTAATAAAACGGGTAACAATATTGTTACTAGAATGAACTCATTATCTAGTGAATTGAATGAAGTAGTAGTAACTGCATTAGGAATTAAGAAGCAGGAGAAAGCATTGGGCTATTCTGCTCAAACCATGAAAGAGGGAGATGTATTAGATGCTCGTTCAAATAACTGGGTAAGCTCATTATCAGGAAAAGTAGCAGGATTGAATTTGTATTCTGCGGGTGGTGCTGGATCAGGTTCAGATGTACCTGTAGATTTTGGCAATGGTGTATTAACCCCCTAA
PROTEIN sequence
Length: 172
MQTTFVYAQSLADLTGTVLNEKGDPLSSVTVLLQTKGAGNQTVTTNEKGNYTFKQLAIGNKYNLTFSYVGFTPIAQTITINKTGNNIVTRMNSLSSELNEVVVTALGIKKQEKALGYSAQTMKEGDVLDARSNNWVSSLSGKVAGLNLYSAGGAGSGSDVPVDFGNGVLTP*