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FFSP_072018_mid_0_1um_scaffold_1921_7

Organism: FFSP_072018_mid_0_1um_Sphingobacteria_36_79

near complete RP 45 / 55 MC: 2 BSCG 48 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: 5948..6622

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor rpoD n=1 Tax=Segetibacter koreensis RepID=UPI000375E1C3 similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 224.0
  • Bit_score: 432
  • Evalue 2.20e-118
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 224.0
  • Bit_score: 430
  • Evalue 1.80e-118
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 224.0
  • Bit_score: 438
  • Evalue 5.70e-120

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 675
GTGGTTTCTGTTGCAAAACAATACCAACACCAAGGTTTATCACTTAGTGACCTTATTAACGAAGGAAATTTAGGTTTAATAAAAGCTGCTCAGCGTTTTGATGAAACCAAGGGTTTCAAATTTATTTCTTACGCTGTATGGTGGATTCGTCAATCTATTTTACAAGCATTAGCTGAACAAGGACGTTTAGTTCGTTTGCCACAAAACAAAATTGGTACTTATAACAAGGCCAACAAAGCATACATGGCATTTGAACAAGAACATGAGCGTGAACCTTCTACGGAAGAGTTGGCGGAGATTCTTGAAATGAGTGAAACAGAAATTAATAATATTTTCCAAAGTAATACCAGACATACTTCATTAGATGCTCCTGTACACGAAGCAGAAGATGTGGCTATGGGAGATTTATTAGAAGGTTCTGATGATACCGACGAAGATGTAATGAAAGATTCATTAAGAGAAGAAATTCGTAGGGTGTTGAAGTCATTAAGCCCTAGAGAAGCGGAAATCGTGAATGCATATTTTGGTTTAGACGGAGAAAATGGCGTGACTATTGAACAAATAGGAATGAAGTACGACCTAACCAAAGAAAGAATCAGACAAATTAAAGAGCGTGCCATAAAGCGTTTACAGAAAGCGCGTTACAGCAATGCACTTAAAGCATATTTGGGTTAA
PROTEIN sequence
Length: 225
VVSVAKQYQHQGLSLSDLINEGNLGLIKAAQRFDETKGFKFISYAVWWIRQSILQALAEQGRLVRLPQNKIGTYNKANKAYMAFEQEHEREPSTEELAEILEMSETEINNIFQSNTRHTSLDAPVHEAEDVAMGDLLEGSDDTDEDVMKDSLREEIRRVLKSLSPREAEIVNAYFGLDGENGVTIEQIGMKYDLTKERIRQIKERAIKRLQKARYSNALKAYLG*