ggKbase home page

FFSP_072018_mid_0_1um_scaffold_1247_7

Organism: FFSP_072018_mid_0_1um_Sphingobacteria_36_79

near complete RP 45 / 55 MC: 2 BSCG 48 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: 5010..6275

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Pedobacter agri RepID=UPI00029B19F2 similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 381.0
  • Bit_score: 277
  • Evalue 1.30e-71
polysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 27.5
  • Coverage: 407.0
  • Bit_score: 177
  • Evalue 6.90e-42
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 413.0
  • Bit_score: 417
  • Evalue 2.00e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1266
ATGAACAAAGAAAGTATTAAATATTTTGTAAAAAAGAATGCAGGATTTTTTGCCAATTTTACCAACCTTGGATTTATTCAGGTTTCTAATATATTGATTCAACTCATCTTATTCCCGGTTATTATTAGAGTTGTAGGATTGGAATCATTTGGATATGTGGCCGTTGCAAATGCTATGGCAGGCTTTATTGGTCTATTTATAAATTACGGAACTAATTTATCTGGAATTAAAGATGTTGCGCTTCAAAAAAATAATCCATCTCAACTCTCTGCACTATTCTTTGGCATTTACTATACTAGAATTGCTCTATTTGTTCCAGTCATATTAATATTCATAGCATTATACTTATTCCAATACAATCAATTTTTATATATTCTTTTTGCCACACCCATTATTTTGGCTGAAGTGGTTAACCCATTATTTTTTTTCAATGGAATTGAAAAGTTAACGCTTTATAATACTGCGAATCTATTGGCAAAACTAGGTTCGGCATTCCTCATTATTTTTTTTATAGATGAAAACGCGCCTGCATGGTTAGTCAACTTTTATTTAGGGATTACCAATTTCTTTTTTTATGGCTGTTTAGCAATCTATGCCATCAATAAATACAAATTACCAATTCCGCTGTACCGAATATCATCAGTTATCCCAATTATAAAGGATAATTTTTATCTTGTATGTAACAACCTATCTGTGCATTTGCAACAGTCGTTTTTCTTATTCCTTTTGCCGGTAGTAAGCACTCCCATGATTATAGGTGCGTACTCGTTAGCAGATAAAGTCATTTCCTCTTTCAGAATTCTTTTAGTTGCGTTTTCAAGTGCACTTTATCCCAAAACCGCACTCTTGTATCAGGAAAAAAAAGAGACCTGGCCTTTATTTAAAAAACGTATTAATCGTTTGTTGTTTTTTACGTTTTTACTAATCGCACTATTTGTTTTTTGGGGAAACGAATGGATTGTTTTTTTATTTACAGGTAGTAAAAATATACTTGCTGCAAATTATATCCGTTCCATAGCATGGGTTCCTTTATTGGCTGCAATGAATTCTTTGAATATTATTGAGCTATTAATTAAGAACCAATATAGAGCCATTTTTTACAGCAGTATCAGTTTACTTATTTTTATTTTAATATTCGCTTTTGTTTTTGCATTTATTAATCAAAGTGAATTTTTTGGTTATTATTTAGTACTAGCTGAAGCTGCTGCAATACCAATTAGCTTGTTTTTTATTCGGAAAAACATTCCATCCCTCCCTAAAAACTAA
PROTEIN sequence
Length: 422
MNKESIKYFVKKNAGFFANFTNLGFIQVSNILIQLILFPVIIRVVGLESFGYVAVANAMAGFIGLFINYGTNLSGIKDVALQKNNPSQLSALFFGIYYTRIALFVPVILIFIALYLFQYNQFLYILFATPIILAEVVNPLFFFNGIEKLTLYNTANLLAKLGSAFLIIFFIDENAPAWLVNFYLGITNFFFYGCLAIYAINKYKLPIPLYRISSVIPIIKDNFYLVCNNLSVHLQQSFFLFLLPVVSTPMIIGAYSLADKVISSFRILLVAFSSALYPKTALLYQEKKETWPLFKKRINRLLFFTFLLIALFVFWGNEWIVFLFTGSKNILAANYIRSIAWVPLLAAMNSLNIIELLIKNQYRAIFYSSISLLIFILIFAFVFAFINQSEFFGYYLVLAEAAAIPISLFFIRKNIPSLPKN*