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FFSP_072018_mid_0_1um_scaffold_2143_4

Organism: FFSP_072018_mid_0_1um_Sphingobacteria_36_79

near complete RP 45 / 55 MC: 2 BSCG 48 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: comp(4224..4820)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPL8_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 197.0
  • Bit_score: 216
  • Evalue 2.20e-53
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 201.0
  • Bit_score: 216
  • Evalue 6.30e-54
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 185.0
  • Bit_score: 344
  • Evalue 5.80e-92

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 597
ATGCAACACCAATATTTTTTATTGAATAAGCCTTACGACATGGTTTCGCAGTTTAAAAGTAGCCATGCTGTTCGCTTATTGGGAGATTTAAACTATCCATTTCCAGATGGCACCCATGCCATTGGTCGGCTTGATCATCATTCAGAAGGATTACTATTACTTACCACAAATAAAAAAGTAACCCGATTACTTTTTCAAGGAGCAATACCACATAAAAGAGTTTACCATGTATTGGTAAATAATCATGTATCAAATGAACAACTGACACAACTAAGCAATGGAGTCAAATTTAAAATAGGTCTCAACGAATACCATACAACTTCCCCCTGCGAAGTTGCGATTGTGAACCCACCCATTGTTCAGTTTCCAGGCGCCTATATACAATCAGACAGAGTGCCCCATACTTGGCTAAGTATTGAATTAACCGAGGGGAAGTATCATCAAGTTAGAAAAATGCTCACTGCAGTTCAACTCAAATGTAAGAGACTGGTAAGGGTGAGTATAGAAGACCTTCATCTAAGCAATTTGGCTCCAGGGCAAGTAAAAGAAATTCAAGAAATTGATTTCTTTGCTTCACTAAAAATTATCAATTATTGA
PROTEIN sequence
Length: 199
MQHQYFLLNKPYDMVSQFKSSHAVRLLGDLNYPFPDGTHAIGRLDHHSEGLLLLTTNKKVTRLLFQGAIPHKRVYHVLVNNHVSNEQLTQLSNGVKFKIGLNEYHTTSPCEVAIVNPPIVQFPGAYIQSDRVPHTWLSIELTEGKYHQVRKMLTAVQLKCKRLVRVSIEDLHLSNLAPGQVKEIQEIDFFASLKIINY*