ggKbase home page

FFSP_072018_mid_0_1um_scaffold_5588_1

Organism: FFSP_072018_mid_0_1um_Sphingobacteria_36_79

near complete RP 45 / 55 MC: 2 BSCG 48 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: 3..1301

Top 3 Functional Annotations

Value Algorithm Source
isopropylmalate isomerase (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 429.0
  • Bit_score: 642
  • Evalue 4.60e-182
3-isopropylmalate dehydratase large subunit n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MNL4_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 429.0
  • Bit_score: 642
  • Evalue 2.70e-181
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 432.0
  • Bit_score: 847
  • Evalue 6.00e-243

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1299
CCTCAAGCTTTCAAGGGAATTGAAAAGCGAGGACTTCCTTTATTCAGACCAAAGCAAACCATTGCAACAGCAGACCACAATGTGCCTACATTGAATCAGCATTTACCTATTAAAGACCAGCTGAGTAAAATGCAGGTTGACCAATTAATTGAGAATTGTGAAAAACATGGGGTTGAATTATATGGACTAGGACATCCTTATCAAGGTATTGTACATGTGATAGGTCCGGAATTGGGAATTACACAACCAGGAATGACCATTGTTTGTGGAGACAGTCATACCAGTACTCATGGAGCATTTGGCACCATTGCATTTGGAATTGGAACCAGTGAAGTGGAAATGGTATTTGCTTCACAATGTGTGTTGCAAACCAAGCCCAAAACCATGCGCATCAATATTGAGGGCAATTTGCCAAATGGGGTTGTTTCAAAAGATATTATTTTATACATCATTGCTAAAATTTCTGCCAGTGGTGCAACAGGATATTTTGTGGAGTATGCAGGTAGTACCATTCGCTCACTTTCTATGGAAGCTAGAATGACCATTTGCAATATGAGTATTGAAATGGGCGCTAGGGGTGGAATGATTGCACCAGATGAAATCACTTTTAATTATATTAAAGGAAGAATCTATGCGCCAAAGGGTGCAGATTGGGATAAGCAATTAGCCAATTGGAAAAAATTGTATTCGGATCAAGACGCAATATTTGATGCAGAAATAAATATTAATGCTGCTGAAATTGCTCCGATGATTACCTATGGTACCAATCCAGGATTGGGTATGGCCATTGATGGAAATATTCCATTGACCGAATCAATCACTAATGAAGGCGAAAAGAAAAATTTAGCTCAAGCATTAACCTATATGGGATTAAATAGTGGAGCGGCCTTATTAGGAATGCCTGTTCAACATGTTTTTATTGGAAGTTGTACCAATTCTAGAATTGAAGATCTAAGATTGGTAGCTGAATTAGTAAAAGGTAGAAAGAAACACGAGTCAGTAAAAGTAATGATCGTGCCAGGCTCTCAACAAGTAGCTAAACAAGTACATGCAGAAGGATTAGATCGAATTTTTTCTGAAGCGGGTTTTCAAATACGGCAAGCAGGTTGTAGTGCTTGTTTGGGAATGAACGAAGACAAAATTCCAGCCGGCGAATATTGTATTAGTACCAGTAATAGAAATTTTGAAGGCAGGCAAGGTGCAGGCGCAAGAACATTATTGGCGAGTCCATTAACAGCTGCAGCTGCTGCTATTACTGGTGTAGTAACTGATGTAAGAGAATTAATTAATCATAATTAG
PROTEIN sequence
Length: 433
PQAFKGIEKRGLPLFRPKQTIATADHNVPTLNQHLPIKDQLSKMQVDQLIENCEKHGVELYGLGHPYQGIVHVIGPELGITQPGMTIVCGDSHTSTHGAFGTIAFGIGTSEVEMVFASQCVLQTKPKTMRINIEGNLPNGVVSKDIILYIIAKISASGATGYFVEYAGSTIRSLSMEARMTICNMSIEMGARGGMIAPDEITFNYIKGRIYAPKGADWDKQLANWKKLYSDQDAIFDAEININAAEIAPMITYGTNPGLGMAIDGNIPLTESITNEGEKKNLAQALTYMGLNSGAALLGMPVQHVFIGSCTNSRIEDLRLVAELVKGRKKHESVKVMIVPGSQQVAKQVHAEGLDRIFSEAGFQIRQAGCSACLGMNEDKIPAGEYCISTSNRNFEGRQGAGARTLLASPLTAAAAAITGVVTDVRELINHN*