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FFSP_072018_mid_0_1um_Sphingobacteria_36_79

FFSP_072018_mid_0_1um_RIFOXYD2_FULL_Sphingobacteria_35_12_curated_36_79
In projects: FFSP_072018_mid_0_1um  |  SOB_across_mines

Consensus taxonomy: RIFOXYD2_FULL_Sphingobacteria_35_12_curated  →  Sphingobacteria  →  Bacteroidetes  →  Bacteria

Displaying items 1-50 of 554 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_072018_mid_0_1um_scaffold_17134
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1018 bp 35.46 79.42 99.90
FFSP_072018_mid_0_1um_scaffold_16951
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1026 bp 36.84 60.38 97.95
FFSP_072018_mid_0_1um_scaffold_16923
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1027 bp 34.86 74.49 100.49
FFSP_072018_mid_0_1um_scaffold_16935
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1027 bp 32.72 69.81 99.61
FFSP_072018_mid_0_1um_scaffold_16863
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1029 bp 39.75 60.35 99.71
FFSP_072018_mid_0_1um_scaffold_16811
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (66.67%)
3 1031 bp 34.24 70.42 96.02
FFSP_072018_mid_0_1um_scaffold_16749
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1033 bp 36.11 64.91 98.16
FFSP_072018_mid_0_1um_scaffold_16672
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
3 1036 bp 37.07 80.79 97.01
FFSP_072018_mid_0_1um_scaffold_16602
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1039 bp 35.51 49.95 92.11
FFSP_072018_mid_0_1um_scaffold_16428
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (66.67%)
3 1045 bp 35.89 65.17 94.16
FFSP_072018_mid_0_1um_scaffold_16185
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1055 bp 33.18 81.75 99.81
FFSP_072018_mid_0_1um_scaffold_16137
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1057 bp 37.65 52.51 99.62
FFSP_072018_mid_0_1um_scaffold_16110
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1059 bp 37.49 82.72 99.72
FFSP_072018_mid_0_1um_scaffold_16074
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1060 bp 34.53 76.84 99.06
FFSP_072018_mid_0_1um_scaffold_15956
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1065 bp 37.84 69.30 99.72
FFSP_072018_mid_0_1um_scaffold_15814
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (50%)
2 1070 bp 35.51 73.46 98.13
FFSP_072018_mid_0_1um_scaffold_15818
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1070 bp 37.01 67.01 95.61
FFSP_072018_mid_0_1um_scaffold_15783
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1071 bp 34.83 77.03 93.28
FFSP_072018_mid_0_1um_scaffold_15757
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
3 1072 bp 36.10 62.83 91.51
FFSP_072018_mid_0_1um_scaffold_15775
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1072 bp 33.12 66.46 84.24
FFSP_072018_mid_0_1um_scaffold_15719
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1074 bp 36.41 52.65 93.02
FFSP_072018_mid_0_1um_scaffold_15554
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1082 bp 38.17 61.69 100.09
FFSP_072018_mid_0_1um_scaffold_15403
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1089 bp 34.16 83.33 98.07
FFSP_072018_mid_0_1um_scaffold_15233
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1096 bp 37.23 57.21 96.90
FFSP_072018_mid_0_1um_scaffold_15132
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1100 bp 37.73 55.36 94.64
FFSP_072018_mid_0_1um_scaffold_15125
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (66.67%)
3 1101 bp 36.88 93.19 96.73
FFSP_072018_mid_0_1um_scaffold_14910
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1112 bp 33.00 99.15 91.46
FFSP_072018_mid_0_1um_scaffold_14761
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1119 bp 37.00 82.44 97.32
FFSP_072018_mid_0_1um_scaffold_14388
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1138 bp 35.94 46.79 99.65
FFSP_072018_mid_0_1um_scaffold_14230
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
3 1145 bp 37.38 74.41 86.20
FFSP_072018_mid_0_1um_scaffold_14159
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1149 bp 38.99 71.93 93.47
FFSP_072018_mid_0_1um_scaffold_13659
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1175 bp 35.15 83.62 99.83
FFSP_072018_mid_0_1um_scaffold_13649
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1176 bp 29.76 59.82 79.85
FFSP_072018_mid_0_1um_scaffold_13160
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
3 1204 bp 39.12 57.68 102.41
FFSP_072018_mid_0_1um_scaffold_13120
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1206 bp 35.07 73.63 94.28
FFSP_072018_mid_0_1um_scaffold_12947
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1218 bp 36.70 88.42 97.54
FFSP_072018_mid_0_1um_scaffold_12893
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1221 bp 33.99 52.58 100.00
FFSP_072018_mid_0_1um_scaffold_12894
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1221 bp 34.89 75.68 98.53
FFSP_072018_mid_0_1um_scaffold_12803
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1227 bp 40.59 68.09 99.76
FFSP_072018_mid_0_1um_scaffold_12769
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1229 bp 36.94 90.81 93.25
FFSP_072018_mid_0_1um_scaffold_12746
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1230 bp 37.64 47.32 88.29
FFSP_072018_mid_0_1um_scaffold_12714
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1231 bp 38.99 55.44 87.00
FFSP_072018_mid_0_1um_scaffold_12733
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1231 bp 38.59 69.94 99.19
FFSP_072018_mid_0_1um_scaffold_12688
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1233 bp 36.33 53.77 91.24
FFSP_072018_mid_0_1um_scaffold_12686
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1233 bp 38.44 80.17 99.51
FFSP_072018_mid_0_1um_scaffold_12653
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1235 bp 36.36 56.96 99.84
FFSP_072018_mid_0_1um_scaffold_12629
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1237 bp 38.16 90.95 99.19
FFSP_072018_mid_0_1um_scaffold_12545
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (66.67%)
3 1243 bp 30.17 93.16 92.20
FFSP_072018_mid_0_1um_scaffold_12463
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1249 bp 35.47 70.74 94.64
FFSP_072018_mid_0_1um_scaffold_12313
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1259 bp 32.88 77.32 95.55
Displaying items 1-50 of 554 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.