ggKbase home page

FFSP_09252017_12_scaffold_1231_8

Organism: FFSP_09252017_12_Sphingobacteria_36_66

partial RP 32 / 55 MC: 2 BSCG 35 / 51 MC: 3 ASCG 9 / 38
Location: comp(6523..9945)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor n=1 Tax=Segetibacter koreensis RepID=UPI00037008A6 similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 1135.0
  • Bit_score: 1794
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 1148.0
  • Bit_score: 1703
  • Evalue 0.0
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 1134.0
  • Bit_score: 2222
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3423
ATGAATTTGCAGCACTTAATGGATCAATACCTGCAATCACCCCTGGTACAAGAGTTGGTGAATAGGCAAACTTATGCCGATACACAAAAAACTTATCTCAGTAATTTACAAGGAAGTAGTGCAGAATTTATAGTAAGTACTGTTTTTATGCATCCTGATGCACAGGGCATGAATCATTTAGTTATTTTAAATGATGCAGAAGAAGCAGCTTATTTTCATAATACCATTGAAAATTTAACCAGTGCTTTAGACTTGTTTTATTTTCCTGCAAGTTTCAAGAATAGGAAAAATTTCAGGCTACTGAATAGTTCGCATGTGATGTTGAGAACGGAAGCACTCACCAAGCTATCACGTGGTGGGAATAAAAAAATTATTATAACCTATCCCGAAGCCATTTTTGAAAAAGTAATTCTGCCTGAAACAATAAGCAGTAATATTATTACTATCAAAACAAATGATACCATTAATCCAGAGAGTTTAATGGACTTGTTTGTTATGTATGGTTTTGAGCGAACAGATTTTGTATACGAGCCTGGCCAGTTTGCTTTGCGAGGAGGAATACTAGATATTTATTCTTTTGGAAATGAGAAACCTTACAGAGTAGAATTATTTGGGAATGAAGTAGACAGTATTCGAATTTTTGATCCTGAAACGCAATTAAGCGAAAGAAAATTATTGCAGGTAAATATTATTCCTAATGTAGATACACTACCAGAAACATTTGGTGCAGGTTCTGTGCAAAAAATATCCTTGCTAGAATTTGTTCCGGAAAATACCATTGTATGGTTAAGAGATTGGGATGTGATTGAAGAAAAAATTAGGGTACAAGAAGAAGATTTTGAAGGATATTTATTGTTACAAGAACAAGGTTATTTTACCAAACAACAAGAAGAGGAAGAGCACCATATACTTAAAGAAGTACATTGGACCGATTTTATAAAAGGCAATGAAATCAAAACGATTTTAGAAAATAAACCACTGATAGAATTTGGATACAAACCCCATTTCGCAAAGTTTGAATTATCATTTTTAGTTAAGCCACAGCCAGCATTTAATCGTCAATTTGATTTGCTGATTAAAGATTTAAAAGCTTTAGAAGGGGCTCAATACGGAATTTATATTTTTGCAGAACAGGTAAAACAATTAGAAAGACTCAACACTATTTTTACCGATTTAAACACCGAAATTCAATTCACTCCAATTGGAACTAGTATTCATGAAGGCTTTATTGACCATCAATTAAAATTGGTTTGTTATACTGATCACCAAATTTTTCAGCGATACCATAAATACAAGGTTAAGCAAGCATATAATAAAAATAAAGCCCTCACTTTAAAAACACTAAGAGATTTACAGCCAGGTGATTATGTAACGCATATTGATCATGGTGTTGGAACATATAGTGGTTTGCAAAAGCTAGAAGTGAATGGAAAAATTCAAGAAGCAGTCAGAATTATTTATAAAGACAGCGATATTTTATATGTGAATATAAACTCACTGCACAAAATTTCTAAATATACTGGTAAAGAAGGAACTGTTCCAAAAGTTAATAAACTAGGAAGTGATGTTTGGAATAGATTGAAAGAAAAAACAAAAGCTAAGGTAAAAGAAATCGCTTTTGATTTAATAAAGCTATACGCTCAAAGAAAGGCCCAGAAAGGGTTTGCACACGCTCCTGATAATTATATGCAAACCGAGCTGGAAGCCTCTTTTATTTATGAAGACACGCCCGATCAAAGTAAAGCCACTGCAGATGTAAAAAAAGACATGGAACAAGAAGCACCCATGGATCGATTGGTATGTGGAGATGTAGGATTTGGTAAAACAGAAATTGCTATTAGGGCAGCTTTTAAATCGGTAGTAGATGGAAAGCAGGCAGCAGTTTTAGTTCCTACCACTATTTTAGCTTTTCAGCATTATAAAACATTTAAAGACCGATTAAAAGATTTTCCTGTAACCGTTGATTATATTAATCGATTTAAATCTGCTAAAGAAAAAAAAGAAACCTTACAAAGGGTTAAAGAAGGAAAAGTAGACATTATTGTAGGTACCCATGGATTACTAGGAAAAGAAGTTGAGTTTAAAGATTTGGGCATCATGATTATTGATGAAGAGCAAAAATTTGGCGTAGGGCATAAAGAAAAATTAAAGACCTTAAAAACAAATGTAGACTGCCTTACATTAACCGCTACCCCCATTCCAAGAACTTTGCAGTTTAGTTTAATGGGAGCTAGAGATTTGAGCATCATCAACACACCTCCACCGAATAGACAACCGATTCAAACAGAAGTACAAGTATTTAATCAAGACTTTATACGCGATACTATTTATTTTGAAACAGAAAGAGGAGGACAGGTTTTCTTTATCCATAATAGGGTGCACGGATTGGCAGAAATGAGTGCACTTATTCAAGGTTTGTGTCCTGATTTAAGTATTGGTTTTGCCCATGGTCAATTAGAAGGACACGAATTGGAAGAGCGTATTTTCGACTTTATCGAACGCAAATACGATGTATTGGTTTGTACAAATATTGTGGAAAGTGGAGTAGATATTCCTAATGTAAATACCATTATTGTAAATAATGCCCATCAATTTGGATTAAGTGATTTGCATCAATTAAGGGGTAGGGTAGGAAGAAGTAATAAAAAAGCTTTCTGTTATTTGTTAGCACCTCCAATGAGCACTTTGCCTGTTGACTCTAGAAAAAGATTGCAAACCTTAGAACAGTTTAGTGATTTAGGGAGTGGATTTCAGATAGCCATGAGAGATTTGGATATTAGAGGGGCAGGTAATATGTTAGGTGGAGAACAAAGCGGCTTTATGGCGGAGATTGGTTTTGAAATGTACCAGAAAATATTAGAAGAAGCCATTCGAGAATTAAAGCGAACTTCTTTTAAAGATTTATTTAAAGAAGAGATTAGTAAGCAAGATGATTTTGTAAGCGACTGTACCATCGATACCGATTTAGAAATATTAATCCCGGATAGCTATGTGGAAAGTATTACAGAAAGACTATCGCTCTATACTCGTTTAGACAGTTGTGAAGACGAAGCCGAATTGCAATCTTTTCACGCAGAAATGCTGGATCGTTTTGGCCCAATGCCCGAATCGGTGGAAGATTTGTTTACTACTGTTAGATGCCGCAAATTGGCAGTAGACTTAGGTTTTGAAAAAATGACTTTAAAGGAAGACACCCTTCGTTGCTATTTTATTAATAGACCCGACTCACCCTATTTTGAATCTGAATTGTTTAAAGAAGTATTGGCTTATTTACAAACAGGAACCAATAAAGGAAGATTAAAACAAACCGGTAAAATGTTCCTAATGGTGGTAGAACCCATCAAGGGAATGGAGGAAATGCATGGCTTTTTGCAGAAAATGCATACAACCGTAATTGCCCAATATAAAAAAACCCCGAACTAG
PROTEIN sequence
Length: 1141
MNLQHLMDQYLQSPLVQELVNRQTYADTQKTYLSNLQGSSAEFIVSTVFMHPDAQGMNHLVILNDAEEAAYFHNTIENLTSALDLFYFPASFKNRKNFRLLNSSHVMLRTEALTKLSRGGNKKIIITYPEAIFEKVILPETISSNIITIKTNDTINPESLMDLFVMYGFERTDFVYEPGQFALRGGILDIYSFGNEKPYRVELFGNEVDSIRIFDPETQLSERKLLQVNIIPNVDTLPETFGAGSVQKISLLEFVPENTIVWLRDWDVIEEKIRVQEEDFEGYLLLQEQGYFTKQQEEEEHHILKEVHWTDFIKGNEIKTILENKPLIEFGYKPHFAKFELSFLVKPQPAFNRQFDLLIKDLKALEGAQYGIYIFAEQVKQLERLNTIFTDLNTEIQFTPIGTSIHEGFIDHQLKLVCYTDHQIFQRYHKYKVKQAYNKNKALTLKTLRDLQPGDYVTHIDHGVGTYSGLQKLEVNGKIQEAVRIIYKDSDILYVNINSLHKISKYTGKEGTVPKVNKLGSDVWNRLKEKTKAKVKEIAFDLIKLYAQRKAQKGFAHAPDNYMQTELEASFIYEDTPDQSKATADVKKDMEQEAPMDRLVCGDVGFGKTEIAIRAAFKSVVDGKQAAVLVPTTILAFQHYKTFKDRLKDFPVTVDYINRFKSAKEKKETLQRVKEGKVDIIVGTHGLLGKEVEFKDLGIMIIDEEQKFGVGHKEKLKTLKTNVDCLTLTATPIPRTLQFSLMGARDLSIINTPPPNRQPIQTEVQVFNQDFIRDTIYFETERGGQVFFIHNRVHGLAEMSALIQGLCPDLSIGFAHGQLEGHELEERIFDFIERKYDVLVCTNIVESGVDIPNVNTIIVNNAHQFGLSDLHQLRGRVGRSNKKAFCYLLAPPMSTLPVDSRKRLQTLEQFSDLGSGFQIAMRDLDIRGAGNMLGGEQSGFMAEIGFEMYQKILEEAIRELKRTSFKDLFKEEISKQDDFVSDCTIDTDLEILIPDSYVESITERLSLYTRLDSCEDEAELQSFHAEMLDRFGPMPESVEDLFTTVRCRKLAVDLGFEKMTLKEDTLRCYFINRPDSPYFESELFKEVLAYLQTGTNKGRLKQTGKMFLMVVEPIKGMEEMHGFLQKMHTTVIAQYKKTPN*