ggKbase home page

FFSP_09252017_12_scaffold_1552_9

Organism: FFSP_09252017_12_Sphingobacteria_36_66

partial RP 32 / 55 MC: 2 BSCG 35 / 51 MC: 3 ASCG 9 / 38
Location: comp(6258..7427)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein AraC type id=4213889 bin=GWF2_Bacteroidetes_42_66 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 similarity UNIREF
DB: UNIREF100
  • Identity: 24.4
  • Coverage: 336.0
  • Bit_score: 88
  • Evalue 1.10e-14
PAS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 21.7
  • Coverage: 337.0
  • Bit_score: 78
  • Evalue 4.00e-12
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 389.0
  • Bit_score: 757
  • Evalue 5.70e-216

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1170
ATGTTCTTATTTGTTCGGACATTGCTTTATAGGGAAACTCATTTTAGAAAAAATGATTGGTTGCACACTATTCCTTTTGTAATAAGTGTTATTGAGTTGATACCCTTTTATTTTAGTGGAGCAGAACATAAATTGGGAATTCTTCAAAATAGTGATTTAGATTTTGCTACCCATATTACCAATTTCAATGAAGGGTTTATTGGTAAAGATTTGCATTACTTGTTTAAAGCAGGCAGTTGGGCTATTTATTTTTATTTCTCTCTAAAAGTTTATTTTACTTTTAGAAAGAAAATTAAAACTGATATTATTTCTGATTACAATAGAAAATTTGCTTTTTTACGATTTTTTTTATTGACTAAGGTAATTGGCTTTTTTCTTTTAAATATAACAACGTTGTTTGCGCATAGCAATCAATTATATACAAGCATTTTAATTGCTAGTAATTTCATCAGCTTAATCAATATATTTCTTTTGGCTTTTGAATATCCTGAAATGATATATGGGAAAGACTTTTACTCTGTCACTGAAAATAATAGAGAGAACTTAATGAAGATTGTGATGAGTCAAACTGAAAACTTGAAGTTTTTAGAAAACAGCAGACACGAGGCAAATATTCTATTAGATGTAAATTATAGAGTTATCTATTTTAACAAGTTAGCTGAGATCAAATTTTGTGAACTTTACAATCATTCATTACAATTGAATGACAATTTTACGGATTATCTTGATCCGGTTTCTAAGGATAATTTTTTTACGTATTTCCAACAATCCCTACAGGGGAAAACCATACAGGCAGAAGAAAAAATCATGTTACATAATGAATCAAACTTTACTTGGTTGCAAATTAGTTTTATTGCTCATTATGCTGAAAATGGCAAATTGATTGGAGTTTCAATTGGTGCAACAGCTATTGATGCAAAAAGAAAAATGGAGCAATTACAAGCGAAATATTTACAGAGTCTTGATGAGTTGGCATGGAACAGTTCTCATATACTAAGAGCCCCTGTTGCAAATATGATGGGAATACTTCAACTTTTACAAGAAACCAATATTGCTTTAGATGATACAGAAAGGGCTCAATTTTTGAAACACTTATCTAGCGAGGTAAAAAGGGTAGATACAGTTATTAAAGATATGGTAGCAAAAGCTAGAAAGGATTTAGAAAATTAA
PROTEIN sequence
Length: 390
MFLFVRTLLYRETHFRKNDWLHTIPFVISVIELIPFYFSGAEHKLGILQNSDLDFATHITNFNEGFIGKDLHYLFKAGSWAIYFYFSLKVYFTFRKKIKTDIISDYNRKFAFLRFFLLTKVIGFFLLNITTLFAHSNQLYTSILIASNFISLINIFLLAFEYPEMIYGKDFYSVTENNRENLMKIVMSQTENLKFLENSRHEANILLDVNYRVIYFNKLAEIKFCELYNHSLQLNDNFTDYLDPVSKDNFFTYFQQSLQGKTIQAEEKIMLHNESNFTWLQISFIAHYAENGKLIGVSIGATAIDAKRKMEQLQAKYLQSLDELAWNSSHILRAPVANMMGILQLLQETNIALDDTERAQFLKHLSSEVKRVDTVIKDMVAKARKDLEN*