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FFSP_09252017_12_Sphingobacteria_36_66

FFSP_09252017_12_RIFOXYD2_FULL_Sphingobacteria_35_12_curated_36_66
In projects: FFSP_09252017_12  |  SOB_across_mines

Consensus taxonomy: RIFOXYD2_FULL_Sphingobacteria_35_12_curated  →  Sphingobacteria  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Displaying items 101-150 of 187 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_09252017_12_scaffold_8687
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (57.14%)
7 7040 bp 37.06 55.89 94.30
FFSP_09252017_12_scaffold_10243
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
7 6248 bp 36.52 68.61 93.53
FFSP_09252017_12_scaffold_8226
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (85.71%)
7 5429 bp 36.54 69.21 95.71
FFSP_09252017_12_scaffold_2703
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
7 9553 bp 35.40 69.48 96.25
FFSP_09252017_12_scaffold_10363
Phylum: Bacteroidetes (71.43%)
7 3672 bp 32.68 63.93 89.79
FFSP_09252017_12_scaffold_5482
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
7 6486 bp 34.63 69.82 96.62
FFSP_09252017_12_scaffold_5848
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
6 6546 bp 38.24 56.42 96.61
FFSP_09252017_12_scaffold_9109
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (83.33%)
6 5389 bp 35.37 62.43 98.92
FFSP_09252017_12_scaffold_7760
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
6 5625 bp 35.48 73.41 95.36
FFSP_09252017_12_scaffold_9141
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
6 3211 bp 34.82 61.48 99.69
FFSP_09252017_12_scaffold_7082
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 4015 bp 36.54 56.86 99.23
FFSP_09252017_12_scaffold_6005
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 4629 bp 35.95 66.92 97.47
FFSP_09252017_12_scaffold_10956
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 3817 bp 34.58 58.99 92.98
FFSP_09252017_12_scaffold_11076
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 3765 bp 36.33 58.61 97.85
FFSP_09252017_12_scaffold_17953
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 2912 bp 38.53 52.28 88.08
FFSP_09252017_12_scaffold_6812
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (60%)
5 4150 bp 36.58 66.72 94.63
FFSP_09252017_12_scaffold_12124
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 4799 bp 35.63 59.86 96.21
FFSP_09252017_12_scaffold_8484
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 4879 bp 36.61 58.94 97.89
FFSP_09252017_12_scaffold_8741
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 3337 bp 36.26 68.32 95.74
FFSP_09252017_12_scaffold_8750
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 3950 bp 36.73 67.33 98.05
FFSP_09252017_12_scaffold_11440
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (80%)
5 3462 bp 36.51 74.96 95.41
FFSP_09252017_12_scaffold_10557
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 3441 bp 35.80 58.15 93.11
FFSP_09252017_12_scaffold_26030
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 3216 bp 35.23 58.82 98.97
FFSP_09252017_12_scaffold_15144
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (80%)
5 4118 bp 36.86 61.52 86.62
FFSP_09252017_12_scaffold_14737
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 5253 bp 37.37 75.81 95.43
FFSP_09252017_12_scaffold_7793
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 3692 bp 34.51 63.01 89.55
FFSP_09252017_12_scaffold_8810
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 4277 bp 34.98 65.30 95.60
FFSP_09252017_12_scaffold_8043
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 3586 bp 36.56 51.74 99.47
FFSP_09252017_12_scaffold_10118
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 2943 bp 33.98 59.28 98.67
FFSP_09252017_12_scaffold_2987
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 8782 bp 35.83 76.20 93.50
FFSP_09252017_12_scaffold_7573
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 3789 bp 36.87 61.08 97.55
FFSP_09252017_12_scaffold_8589
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 4989 bp 36.42 60.70 95.37
FFSP_09252017_12_scaffold_4241
Order: Cytophagales (60%)
5 6325 bp 32.14 67.28 100.51
FFSP_09252017_12_scaffold_7091
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 4009 bp 35.64 56.72 98.93
FFSP_09252017_12_scaffold_8107
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (75%)
4 4545 bp 35.60 62.71 93.47
FFSP_09252017_12_scaffold_11565
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 3155 bp 33.79 71.74 93.95
FFSP_09252017_12_scaffold_7644
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 3758 bp 36.62 58.32 92.12
FFSP_09252017_12_scaffold_11342
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 2667 bp 36.15 63.10 99.10
FFSP_09252017_12_scaffold_16523
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 1943 bp 37.21 55.12 90.79
FFSP_09252017_12_scaffold_5812
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 4768 bp 37.86 58.74 91.74
FFSP_09252017_12_scaffold_7155
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 3973 bp 34.96 66.26 95.52
FFSP_09252017_12_scaffold_7932
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (75%)
4 3631 bp 38.31 69.94 95.51
FFSP_09252017_12_scaffold_5846
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 6673 bp 38.90 76.76 97.51
FFSP_09252017_12_scaffold_9333
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (75%)
4 3153 bp 39.71 42.39 92.96
FFSP_09252017_12_scaffold_9343
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 3151 bp 37.58 66.88 95.78
FFSP_09252017_12_scaffold_5104
Phylum: Nitrospirae (50%)
4 5317 bp 30.73 45.17 81.53
FFSP_09252017_12_scaffold_13530
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 2299 bp 36.19 67.99 79.08
FFSP_09252017_12_scaffold_5392
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 5063 bp 36.32 48.14 95.81
FFSP_09252017_12_scaffold_21087
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 3448 bp 37.56 60.64 90.14
FFSP_09252017_12_scaffold_22952 4 1986 bp 33.74 52.64 62.84
Displaying items 101-150 of 187 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.