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RTP_03222018_0_2um_scaffold_2391_1

Organism: RTP_03222018_0_2um_Betaproteobacteria_48_16

partial RP 38 / 55 BSCG 40 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 1..444

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SZD7_JANMA similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 144.0
  • Bit_score: 212
  • Evalue 1.80e-52
dbpA; ATP-dependent 23S rRNA helicase DbpA similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 144.0
  • Bit_score: 215
  • Evalue 6.10e-54
ATP-dependent 23S rRNA helicase DbpA {ECO:0000313|EMBL:AIY41825.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 144.0
  • Bit_score: 215
  • Evalue 3.00e-53

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Taxonomy

Collimonas arenae → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
AACGTCGATGTCAGCCGTGATGCGGAAGTCCATATCCACAGAATTGGGCGTACAGGGCGTGGTGCGGCGCAAGGTTTGGTGTTGAATTTGGCAACACCCAATGAACTCAAATGGGTGGGGTTGATAGAAGACTACCAAGGCAGCCCTGCACAATGGTTTAACCTGGATGAACTTACCCCGGCAACTGCCGCACCACAACCCGCACCGATGGTGACTTTATTCATGATGGGGGGTAAAAAAGATAAAGTGCGTCCGGGTGATATATTAGGTGCGTTAACGGGCGAAGTTGGACTAAAAAAAGAACAGGTCGGCAAGATTAATGTGTTTGAATTTGTGACTTATGTTGCATTGGACAGACGTATCGTCAATCAGGCTTTTGCCAGATTGAGCACGGGAAATATCAAGGGGCGTAGTTTTAAGATGCGATTAATTACAGTGGCTTAG
PROTEIN sequence
Length: 148
NVDVSRDAEVHIHRIGRTGRGAAQGLVLNLATPNELKWVGLIEDYQGSPAQWFNLDELTPATAAPQPAPMVTLFMMGGKKDKVRPGDILGALTGEVGLKKEQVGKINVFEFVTYVALDRRIVNQAFARLSTGNIKGRSFKMRLITVA*