ggKbase home page

RTP_03222018_0_2um_scaffold_4416_1

Organism: RTP_03222018_0_2um_Betaproteobacteria_48_16

partial RP 38 / 55 BSCG 40 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(2..751)

Top 3 Functional Annotations

Value Algorithm Source
von Willebrand factor type A n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSU7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 256.0
  • Bit_score: 184
  • Evalue 1.20e-43
von Willebrand factor type A {ECO:0000313|EMBL:EIJ34440.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.7
  • Coverage: 256.0
  • Bit_score: 184
  • Evalue 1.70e-43
von Willebrand factor type A similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 263.0
  • Bit_score: 178
  • Evalue 1.40e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
GTGCGCACAGGATTGAGGACAACTTCACTGGATTTGTTCACTAATGTTGTGCCTGATTTGGTTGCTTTATTGGGTCAGCAGTCAGTCGCTGATTTGATTGAGTCCATTATAAAAGTATATCCCAAGACGAGTGCCTCGGTAGTTGATTTAATCATCACGTCGAGTCGGCATCCTGCATTAAAGCTGGGTAGTGCTCCTGCCTTCAAACATTATCTGCTGTTACTGGAAGAACTGGTTGCACTGGCTCCTCGTGGTCTGCGCCCGATGCTGGCGAAACAGGATATTCTATTGGAACGGCTGAGTATCGCTGGATTACAGCGTTGGGTGCGTAACGGCATCGCGCGCTATAGTCGAGATTTTTCAGGGCTGGCGCACTATTTCGCGCTGGAGAATGCAGCATCCTGGAACATGCTCAATCTGGAGGGCAGTAATACGCTGTTCATCCACGAGCGGCGGCGTATAGCACTCTACTTGCGCGCACTCTGGGGTCGCGAGTTCAAGCTACATTCGTTCCCAGTGGGTATCGATGTTAGCGACGGATTAGTAGATCGTAGCTTTATAGATGAACACCAGGTCATCCACTTGCCAGATACTTTTGGCAGCGTGTCTGGCAGAACAGGTCAGGACGTTTACCGTGCTGCAGCCGTGCATGCAGCCGCGCATATTCTCTATTCCCGGCAGACTTTCCTGCGGCAAAAAATTAATCCCATGCAAAACAGTCTGATAGGCTTGATAGAGGATGCGCGCGTG
PROTEIN sequence
Length: 250
VRTGLRTTSLDLFTNVVPDLVALLGQQSVADLIESIIKVYPKTSASVVDLIITSSRHPALKLGSAPAFKHYLLLLEELVALAPRGLRPMLAKQDILLERLSIAGLQRWVRNGIARYSRDFSGLAHYFALENAASWNMLNLEGSNTLFIHERRRIALYLRALWGREFKLHSFPVGIDVSDGLVDRSFIDEHQVIHLPDTFGSVSGRTGQDVYRAAAVHAAAHILYSRQTFLRQKINPMQNSLIGLIEDARV