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RTP_03222018_0_2um_scaffold_17800_1

Organism: RTP_03222018_0_2um_Betaproteobacteria_48_16

partial RP 38 / 55 BSCG 40 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(42..908)

Top 3 Functional Annotations

Value Algorithm Source
UPF0176 protein Hsero_3572 n=2 Tax=Herbaspirillum seropedicae RepID=D8IQD9_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 283.0
  • Bit_score: 303
  • Evalue 2.00e-79
Rhodanese domain protein UPF0176 similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 285.0
  • Bit_score: 305
  • Evalue 1.20e-80
UPF0176 protein LT85_1182 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 285.0
  • Bit_score: 305
  • Evalue 5.70e-80

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Taxonomy

Collimonas arenae → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGAACACCATACTCAACATCGCCGCCTATCGTTTTGTTGCACTCGAACAGCTTCCCGAATTACGTGAGCAATTCCGCCAGCGCACCGCGACCCACCAGCTCAAAGGTACAATATTGCTTACCCCAGAAGGTATCAACCTGTTTTTAGCTGGCATGGTTAATGAACTGGAAGCATTCATCAGCTGGCTCACCGCTGACGCACGTTTTGCGGATATAGAAATCAAGCGTAGCTGGTCGGATGAAATGCCATTTAACCGTATGCTGGTTAAACTAAAAAAAGAAATCATTACCTTCCACCAGCCCGACTTCGACCGTACCGCCAACCCTGCACCGCAACTCCCTGCCAGCGAGTTAAAGAAATGGTACGACGAAGGACGAGAATTTATCATCCTTGATACGCGTAATAATTTTGAATACCAAGTGGGCACATTCAAAAATGCGGTGAATCTGCAACTCAACACGTTTGGCGATTTTGCCGCCGCCGCCGAACAACTGCAAGACTACCGCGACACCCCCATCGTCACTTTTTGCACGGGCGGCATACGCTGCGAAAAAGCCGCACCCTACATGGCAGGCAAGGGATTTAATCAAGTTTATCAATTACAAGGTGGGATACTGAAATATTTTGAAGAGTGCGGTGCTGCGCACTATGACGGCGAATGTTTCGTGTTCGACAAACGCGTCGCGCTAGACGGTCATCTCCAACCTACCGATACTAACCTCTGTTTCGCCTGCCGCACCGTGCTCACCCCAGAACAACAGACTAGCCCTGATTATGTAGAAGGCCTGTCTTGCCCACATTGCATAGGCAAGCAAGCAGTTCAATCGTCCACAACTGCCATTCCTGGGAACAACACTTCCGTATAG
PROTEIN sequence
Length: 289
MNTILNIAAYRFVALEQLPELREQFRQRTATHQLKGTILLTPEGINLFLAGMVNELEAFISWLTADARFADIEIKRSWSDEMPFNRMLVKLKKEIITFHQPDFDRTANPAPQLPASELKKWYDEGREFIILDTRNNFEYQVGTFKNAVNLQLNTFGDFAAAAEQLQDYRDTPIVTFCTGGIRCEKAAPYMAGKGFNQVYQLQGGILKYFEECGAAHYDGECFVFDKRVALDGHLQPTDTNLCFACRTVLTPEQQTSPDYVEGLSCPHCIGKQAVQSSTTAIPGNNTSV*