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RTP_03222018_0_2um_scaffold_35881_1

Organism: RTP_03222018_0_2um_Betaproteobacteria_48_16

partial RP 38 / 55 BSCG 40 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3..1100)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y563_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 30.9
  • Coverage: 391.0
  • Bit_score: 128
  • Evalue 1.10e-26
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 391.0
  • Bit_score: 128
  • Evalue 3.20e-27
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACB32293.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.9
  • Coverage: 391.0
  • Bit_score: 128
  • Evalue 1.60e-26

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
ATGCCGCAGGACAGTACACCTACAAACTCAACTGCTGAATGGTTAACCACACCAACACGACCGCGCTTAATCACCCCGCTTAATTTAGCAGGGTTGGTAATCGCGGTCAGTGCGGTGTTATTCCTGCTTTATCCGCAACAACGGATAGAACAACAACTACGACTTAACAATAATATCGACGCAGTATCTTTGCAATACATGCGTAGCCTACTCACCACGGATCGAAACAATACAACACTCAGGCTACAGCTAGCCAATGCTTATGCCCAAATTGGACAATACACTCTGGCACTCAAAACATTACAAAGGCTCTACATCAATGCCCAACCGCAATGGCGTGAAGCGGCTTACCTTGCACAAATTGACATACTCAGCAAAATTGCTTTTGCCACACCAGCCAACAGTCAACTACGTACCGAAAAATTAGCACAGCTACACACTGCGCTACTGCAAGCTACGCCGCATATTTATCAAACGGCTGCTTTGGCCACGTTTGCACGCATCGCGGAATCCATCGGAGACACGCTATTAGCAGAACACATCATCAGCAAACTCGTCCGCACTACCAGGCAACCAACACTACTTGAACACGCTGCACGCCTTGCATTAAGCAATAGACATTACCTTACCAGTGCACAATACAGCTGGCGCGCCATGCAATTGGCTAAATTGCCTGCTGACAAAACGCGGTATCTCATTCTCACCATGAACACACTGCAATCTGGCGGCTTAGGACACATTGCCCTAGACTGGGTACAGCAACTACCTGCACCGCAATGGCAAACGCCTGAGCTGCTTTACCGCCTCACGAAACTCGCATTAGCCTCGAATCGTCCCGTGCAAGCGAATGAATTCGCCAAACAGTTAACAGGGTTAGATGGCCGTCACCCACCTCGCTTTATTCCTGCTTATGCGGATTTAGCCTATACCGCTTTTTTAGGGAATCGAGATTTAGCTAATGCCCTAAAACTCGCACAACTCGCCGTAGCCAGCGCACCAAATGATGCCATCTGGCGTGAGCGCCTGGCGCATATTGCCGAATGGACTAACCAGCCACAACTCGCACTGGTTCAGTGGCGTTGGCTGGCAATGCATCAA
PROTEIN sequence
Length: 366
MPQDSTPTNSTAEWLTTPTRPRLITPLNLAGLVIAVSAVLFLLYPQQRIEQQLRLNNNIDAVSLQYMRSLLTTDRNNTTLRLQLANAYAQIGQYTLALKTLQRLYINAQPQWREAAYLAQIDILSKIAFATPANSQLRTEKLAQLHTALLQATPHIYQTAALATFARIAESIGDTLLAEHIISKLVRTTRQPTLLEHAARLALSNRHYLTSAQYSWRAMQLAKLPADKTRYLILTMNTLQSGGLGHIALDWVQQLPAPQWQTPELLYRLTKLALASNRPVQANEFAKQLTGLDGRHPPRFIPAYADLAYTAFLGNRDLANALKLAQLAVASAPNDAIWRERLAHIAEWTNQPQLALVQWRWLAMHQ