ggKbase home page

RTP_01242018_0_2um_scaffold_4552_1

Organism: RTP_01242018_0_2um_Hydrogenophilales_61_5

megabin RP 51 / 55 MC: 21 BSCG 48 / 51 MC: 17 ASCG 12 / 38 MC: 4
Location: 2..1519

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA {ECO:0000255|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01703};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 504.0
  • Bit_score: 870
  • Evalue 7.80e-250
ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00038012FC similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 505.0
  • Bit_score: 895
  • Evalue 2.10e-257
lipid A export ATP-binding/permease MsbA similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 504.0
  • Bit_score: 870
  • Evalue 1.60e-250

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
CGCGGCCTCACCAGTTTCGTCAGCACCTACTGCATGGCGTGGGTGGGCAGCCGTCTGGTGATGGATTTACGCGCGGCGATGTTCGACAAGCTGATGACGCTGCCGACGCGCTACTTCGACCAGAACCCGAGCGGCCAGCTGATCGCGCAGCTGGCGTTCAACGTCACCCAGGTGACGCAGTCGGCCACCAGCTCGCTCACCACGCTGGTACGCGACACGGTGACGGTGCTGGGCCTGCTCGGCTATCTGGTGTGGCTCAACTGGCGGTTGACGCTGATCGTGTTCGCGCTGGTGCCACTGACGTTGTGGGTAGTGCGCATGGCGAGCAAGCGCCTGCGCGGGCTGTCGCGCAAGGCGCAGCAAAACATCGGCGACCTGACGCAGGTAGTGGACGAAGCGGTCGGCGGCCATCGCGTGGTCAAGCTCTATGGCGGCGAAGCCTACGAGCAGGAGCGCTTTCTTAGCGCCGCAAATCTGGCACGCGCGTACGAAATGAAGCGCGTCGCCGCCAACGCCGTGTACGAACCGGTGATCCAGTTCATCGCCGCGATTGCGCTGGCGGTCATCGTCTACATCGCCGCCGACCAGGCCAGCGACAACGCCACCACGGTCGGCGGCTTCGTCGCCTTTTTCATGGCGATGCTGCTGCTGTTCGCGCCGTTGAAGCGCCTGACCGCAGTCAACGACCAGCTGCAGCGCGGACTCGCCGCCGCCGAAACGATTTTCTCCATGCTCGACCAGGACGCCGAGCGCGATGCCGGCACCCAGCGCTTTGTCCGCATCGAAGGCCGTCTGGCCTTGCGCGATGTCAGCCTCTGCTACCCCGGCAAAACCATCCCTGCCCTGCATGGCATCGACCTCGACATCGCGCCCGGCGAGACCGTCGCGCTGGTCGGCGCATCGGGCTCCGGCAAGACCACGCTGGCCAACCTGGTGCCGCGTTTTTACGATCCGGATAGCGGCGTCATCACGCTCGACGGCCACGACATCCGCGACATCCAGTTGCAAAATTTGCGCAGCCATATCGCACTGGTGTCGCAGGACGTCACGCTGTTCAACGACACGCTGGGACACAACATCGCCTACGGCAGCAAGCGCGATGCGAGCGTGGATGAAATACGCGCCGCCTGCGTCGCCGCCCATGCCTGGGATTTCATCCAGGCGATGCCCGACGGCCTCGACACCCTAATCGGCGAAAACGGCATGCGTCTGTCCGGCGGCCAGCGCCAGCGCATCGCCATCGCGCGCGCCATCCTCAAGAATGCGCCGATTCTGATCCTCGACGAAGCCACCTCGGCGCTCGACAACGAATCCGAGCGCCACGTGCAGGCCGCGCTGGAAACGCTGATGCAAAACCGCACCACGCTGGTCATCGCGCATCGGCTGTCCACCATCGAACGCGCCAACCGCATCGTGGTACTCGAAGGCGGGCGCATCGTCGAGATCGGCAGCCACGCCGAACTGATCGGAAAACAAGGCCGTTACGCTCAACTCCACGCGCTGCAATTTTCTGCATGA
PROTEIN sequence
Length: 506
RGLTSFVSTYCMAWVGSRLVMDLRAAMFDKLMTLPTRYFDQNPSGQLIAQLAFNVTQVTQSATSSLTTLVRDTVTVLGLLGYLVWLNWRLTLIVFALVPLTLWVVRMASKRLRGLSRKAQQNIGDLTQVVDEAVGGHRVVKLYGGEAYEQERFLSAANLARAYEMKRVAANAVYEPVIQFIAAIALAVIVYIAADQASDNATTVGGFVAFFMAMLLLFAPLKRLTAVNDQLQRGLAAAETIFSMLDQDAERDAGTQRFVRIEGRLALRDVSLCYPGKTIPALHGIDLDIAPGETVALVGASGSGKTTLANLVPRFYDPDSGVITLDGHDIRDIQLQNLRSHIALVSQDVTLFNDTLGHNIAYGSKRDASVDEIRAACVAAHAWDFIQAMPDGLDTLIGENGMRLSGGQRQRIAIARAILKNAPILILDEATSALDNESERHVQAALETLMQNRTTLVIAHRLSTIERANRIVVLEGGRIVEIGSHAELIGKQGRYAQLHALQFSA*