ggKbase home page

RTP_01242018_0_2um_scaffold_2638_4

Organism: RTP_01242018_0_2um_Hydrogenophilales_61_5

megabin RP 51 / 55 MC: 21 BSCG 48 / 51 MC: 17 ASCG 12 / 38 MC: 4
Location: comp(1568..2035)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane protein id=12497727 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 155.0
  • Bit_score: 258
  • Evalue 3.10e-66
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 155.0
  • Bit_score: 246
  • Evalue 3.40e-63
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 155.0
  • Bit_score: 273
  • Evalue 1.70e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGAATGCACTTCGTAGAAACGTCCTGAAAGGTGCCGCAGGCGCCAGCACTGTCGCCATCGCCGTAGCCGCGGGCCTGTTGAAACCTACCCAGGCGATGGCCGCCTGGAACGCTGCCGCCTTCGACGCGAAAAACGTCGGCGGCGCGATGAAAGGCTTGGGCGTATCCGCCCCGGTCGACAGCAAGGACATCATCATCAAGGCACCGGATATCGCTGAAAACGGCGCAGTCGTTCCGGTGGAAGTGACCAGCAACATCGCCGGCACGACCAGCATCGCCATCCTTGCAGAAAAGAACGGCACCCCGCTGGTGGCCGATTTCACGCTGTCCGGCGGCGCCCTGGGCTTTGTGTCCACCCGTATCAAGTCGGCTCAGACTTCACTCGTTCGCGCTGTTGTAAAAGCCGGCGGCAAGTCCTACACCGCTGCCAAGGAAGTCAAGGTCACCATCGGCGGCTGCGGCGGTTAA
PROTEIN sequence
Length: 156
MNALRRNVLKGAAGASTVAIAVAAGLLKPTQAMAAWNAAAFDAKNVGGAMKGLGVSAPVDSKDIIIKAPDIAENGAVVPVEVTSNIAGTTSIAILAEKNGTPLVADFTLSGGALGFVSTRIKSAQTSLVRAVVKAGGKSYTAAKEVKVTIGGCGG*