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RTP_01242018_0_2um_scaffold_2029_1

Organism: RTP_01242018_0_2um_Hydrogenophilales_61_5

megabin RP 51 / 55 MC: 21 BSCG 48 / 51 MC: 17 ASCG 12 / 38 MC: 4
Location: 3..1325

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit id=1347805 bin=GWE1_T_denit_62_9 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 440.0
  • Bit_score: 766
  • Evalue 7.50e-219
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 447.0
  • Bit_score: 382
  • Evalue 1.50e-103
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 440.0
  • Bit_score: 766
  • Evalue 1.10e-218

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
CTCGCCGACTTCCGGGCGCTCACCGCCGGCAAGGTCAGCGTTCGTCTGACGGGCGGCGGTCAGCCCGACGAGGTGTTCAGCGTCGACACGGCCAGCCAGCCCGGCATCTTCCGTCCCGAAGCGTTGCCAAAGCATGCCGGCGAGCGTGAACTGTCGATCGAAGTCGTGACGTCCGAATTCAGCGTCACCCACGAGCTCGGCCCGTTCACGGTCTACCTTGATCGCAAGGCCGCCGAGGCCGAGCCGGCTCCCCACGACGACGAAGGCATCGGCTTCACCAAGGAACAGCAGTGGAAGGTCGACTTCGCCACCGCCGAGGTGGGGACGCGTCCTATCCGCACGGCGATCAATGCAACAGGTGTCCTGCGCGCCCGGCCCGATGGCGAGGCCCAACTCACTGCCGCGGCCGCGGGGCAGGTGCAGCCCGCAGGCGCCTTTCCGCGCCTGGGCCAGCAGGTGAAAAAAGGCGCGTTGCTCGCCTATCTGGTTCCCCGCATGGGCGGTGATGTTGATCTTGCGACCCTGCGCGCGGCGGCAAGCAAGGCCCGGGTTGAACGCGATCTGGCGAGCCAGGAATTAACCCGCATGGAAGCGCTCTTCCGTGCGGAAGCCGTACCCGAGAAACGGGTGCTGGCTGCACGCGCGGCCGCAGCCCTGGCACGCGCTGAACTGAGCGCAACGCAGCAACGCCTGGGTCAGGTCGGCGGCGCTGGCGGGGGCATCCCGCTGCGCGCGCCGGTGTCCGGAACGATTGCGGATGTCCGCGTGTCGCCCGGAGCGTTCGCGCAGGAAGGCGCGCTGCTGTTCCATATCGCCGATCGCAGCAGGCTGTGGCTGGAACTGCGCGTGCCGGAATCCGATGCTGCACGGTTGGCCAGCCCGACCGGTGCCGCGTTCAGGGTGGCGGGCGATGAACGCAACATTGAAATCATTCCCGGCAGGAACGGCCAGCTCGTCGCCGTCGGCGGCGTGGTCGATGCCACGACGCGCACCGTGCCGGTGGTGTTCGAGTTCAGCGCACCCGATCGCAATCTCCCCATCGGCATGGCGGTGCAGGCGCAGGTGTTCGCCGGAGGCGCGCGCGAGACGGTGGCGATTCCGGCGTCGAGCGTGCTCGACGAAAGCGGCATGAGCGTGGTGTTCGTAATGACCGGCGGAGAATCCTTCGAGCGGCGCCAGGTACGCCTCGGCGCGCGCGAAGGCGACTGGGTGGAAGTGCTGGACGGTCTGACGCCGGGTCAGCGCGTGGTCTCGCGTGGCGCCTATCTGATCAAGCTGGCGTCGACCGGCACGGCGCAAATCGGCCACGGCCATGCGCACTGA
PROTEIN sequence
Length: 441
LADFRALTAGKVSVRLTGGGQPDEVFSVDTASQPGIFRPEALPKHAGERELSIEVVTSEFSVTHELGPFTVYLDRKAAEAEPAPHDDEGIGFTKEQQWKVDFATAEVGTRPIRTAINATGVLRARPDGEAQLTAAAAGQVQPAGAFPRLGQQVKKGALLAYLVPRMGGDVDLATLRAAASKARVERDLASQELTRMEALFRAEAVPEKRVLAARAAAALARAELSATQQRLGQVGGAGGGIPLRAPVSGTIADVRVSPGAFAQEGALLFHIADRSRLWLELRVPESDAARLASPTGAAFRVAGDERNIEIIPGRNGQLVAVGGVVDATTRTVPVVFEFSAPDRNLPIGMAVQAQVFAGGARETVAIPASSVLDESGMSVVFVMTGGESFERRQVRLGAREGDWVEVLDGLTPGQRVVSRGAYLIKLASTGTAQIGHGHAH*