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RTP_01242018_0_2um_scaffold_9313_1

Organism: RTP_01242018_0_2um_Hydrogenophilales_61_5

megabin RP 51 / 55 MC: 21 BSCG 48 / 51 MC: 17 ASCG 12 / 38 MC: 4
Location: comp(3..320)

Top 3 Functional Annotations

Value Algorithm Source
CzcC family heavy metal RND efflux outer membrane protein id=12498617 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 108.0
  • Bit_score: 153
  • Evalue 9.50e-35
CzcC family heavy metal RND efflux outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 108.0
  • Bit_score: 127
  • Evalue 1.20e-27
Heavy metal RND efflux outer membrane protein, CzcC family {ECO:0000313|EMBL:AAZ97288.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 108.0
  • Bit_score: 127
  • Evalue 6.00e-27

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGCTTATCCCCAAATTGGCCGGCCGTTTGAGTCGGTTCCCGCTGTGCTGCACGGCGTTGCTGCTGGCGAGTATTGTCGGCACGGCGTTCGCCGAGCCGCTTTCCTTTGATAGTGCCCTGGCGCTGGCCGTGCGCGAAACCCCCGCGCTGCGCGCCGAGGCGGCGCAGGTCGATGCTGCCCGCCATGCGGCGATTCCGGCCGGGGCGTTGCCCGACCCGAAACTGGTACTCGGCATCGACAATCTGCCCATCGAAGGCCCCGACCGTTTCAGCCTGACCCGCGACGGCATGACCATGCGGCGCATCGGCGTCATGCAG
PROTEIN sequence
Length: 106
MLIPKLAGRLSRFPLCCTALLLASIVGTAFAEPLSFDSALALAVRETPALRAEAAQVDAARHAAIPAGALPDPKLVLGIDNLPIEGPDRFSLTRDGMTMRRIGVMQ