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RTP_01242018_0_2um_Hydrogenophilales_61_5

RTP_01242018_0_2um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_61_5
In projects: RTP_01242018_0_2um  |  SOB_across_mines  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 851-900 of 1197 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
RTP_01242018_0_2um_scaffold_5201
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 1987 bp 58.13 5.81 98.89
RTP_01242018_0_2um_scaffold_4804
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 2117 bp 61.69 5.81 93.67
RTP_01242018_0_2um_scaffold_2898
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
8 3383 bp 63.29 5.81 94.62
RTP_01242018_0_2um_scaffold_2393
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 4260 bp 61.43 5.81 96.69
RTP_01242018_0_2um_scaffold_3160
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 3120 bp 53.21 5.82 54.90
RTP_01242018_0_2um_scaffold_5934
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1777 bp 60.89 5.82 76.65
RTP_01242018_0_2um_scaffold_5701
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1830 bp 63.17 5.82 98.69
RTP_01242018_0_2um_scaffold_8307
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1414 bp 62.31 5.83 89.53
RTP_01242018_0_2um_scaffold_5223
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1981 bp 64.82 5.83 99.34
RTP_01242018_0_2um_scaffold_9113
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 1337 bp 64.10 5.83 93.57
RTP_01242018_0_2um_scaffold_4678
Order: Hydrogenophilales (100%)
3 2161 bp 65.71 5.83 98.43
RTP_01242018_0_2um_scaffold_3436
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
6 2883 bp 58.31 5.83 88.80
RTP_01242018_0_2um_scaffold_3463
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2854 bp 65.63 5.83 100.18
RTP_01242018_0_2um_scaffold_6928
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1593 bp 53.92 5.84 91.53
RTP_01242018_0_2um_scaffold_2540
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3984 bp 61.85 5.84 91.64
RTP_01242018_0_2um_scaffold_4509
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
6 2235 bp 50.38 5.84 92.08
RTP_01242018_0_2um_scaffold_3765
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2616 bp 62.84 5.85 89.33
RTP_01242018_0_2um_scaffold_3794
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2591 bp 60.98 5.85 86.72
RTP_01242018_0_2um_scaffold_5071
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2025 bp 63.26 5.85 89.48
RTP_01242018_0_2um_scaffold_3622
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2716 bp 62.70 5.85 95.10
RTP_01242018_0_2um_scaffold_4761
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2130 bp 60.94 5.85 75.63
RTP_01242018_0_2um_scaffold_2627
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3822 bp 58.22 5.85 88.78
RTP_01242018_0_2um_scaffold_11229
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1180 bp 64.83 5.85 93.31
RTP_01242018_0_2um_scaffold_10120
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1255 bp 61.59 5.86 55.22
RTP_01242018_0_2um_scaffold_12689
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1100 bp 63.00 5.86 97.91
RTP_01242018_0_2um_scaffold_2561
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3932 bp 67.09 5.87 100.41
RTP_01242018_0_2um_scaffold_4791
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 2120 bp 64.43 5.87 95.94
RTP_01242018_0_2um_scaffold_5502
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1889 bp 65.11 5.88 95.77
RTP_01242018_0_2um_scaffold_10966
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1198 bp 61.85 5.88 81.89
RTP_01242018_0_2um_scaffold_1216
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (76.92%)
13 10885 bp 63.91 5.88 93.62
RTP_01242018_0_2um_scaffold_6421
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1681 bp 63.77 5.89 91.73
RTP_01242018_0_2um_scaffold_7599
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1502 bp 63.65 5.89 96.47
RTP_01242018_0_2um_scaffold_12818
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1093 bp 60.20 5.90 99.09
RTP_01242018_0_2um_scaffold_3653
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2693 bp 61.27 5.90 100.15
RTP_01242018_0_2um_scaffold_7251
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1550 bp 58.19 5.90 83.03
RTP_01242018_0_2um_scaffold_2655
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 3762 bp 59.49 5.90 94.10
RTP_01242018_0_2um_scaffold_5718
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 1826 bp 55.91 5.91 75.08
RTP_01242018_0_2um_scaffold_1842
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 5991 bp 59.47 5.91 94.24
RTP_01242018_0_2um_scaffold_3799
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2588 bp 63.18 5.91 89.84
RTP_01242018_0_2um_scaffold_5051
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2031 bp 60.96 5.91 99.85
RTP_01242018_0_2um_scaffold_3391
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
6 2918 bp 64.70 5.91 98.59
RTP_01242018_0_2um_scaffold_3660
Order: Hydrogenophilales (100%)
3 2690 bp 61.15 5.91 86.88
RTP_01242018_0_2um_scaffold_9002
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1346 bp 62.56 5.91 100.30
RTP_01242018_0_2um_scaffold_13943
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1038 bp 67.82 5.92 99.13
RTP_01242018_0_2um_scaffold_13952
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1038 bp 48.17 5.92 100.00
RTP_01242018_0_2um_scaffold_3665
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2685 bp 62.01 5.92 82.79
RTP_01242018_0_2um_scaffold_4521
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2228 bp 58.80 5.92 83.89
RTP_01242018_0_2um_scaffold_11965
Order: Hydrogenophilales (100%)
3 1139 bp 54.26 5.93 98.77
RTP_01242018_0_2um_scaffold_3430
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2886 bp 62.72 5.93 88.46
RTP_01242018_0_2um_scaffold_12017
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1136 bp 63.12 5.94 99.82
Displaying items 851-900 of 1197 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.