ggKbase home page

RTP_02272018_0_2um_scaffold_1932_10

Organism: RTP_02272018_0_2um_Betaproteobacteria_47_68

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: 7994..9118

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter periplasmic/surface lipoprotein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CSI8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 366.0
  • Bit_score: 562
  • Evalue 1.80e-157
ABC transporter periplasmic/surface lipoprotein {ECO:0000313|EMBL:EIJ46581.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 366.0
  • Bit_score: 562
  • Evalue 2.60e-157
ABC transporter periplasmic/surface lipoprotein similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 366.0
  • Bit_score: 558
  • Evalue 1.30e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. GW103 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGCGCAAATTTGATTTTTCTGTACCACGCCGAACGTTTCTGAAAACAGTGGGTGTCGCAACGGTGATGACGACGCTTGGACCGCTGGCAAGTCGAGCTGCATTGGCGGCCGACAAGCTGACCGTAGGGGTGATTTATGTCGGTCCGCGTGGCGACTTTGGCTACAATCAGTCCCATGCTCAGGCTGCAGCCAATATCAAAAAACTGGCTGGGATTAAAGTGGTTGAAGAAGAGAAAGTATCGGAGACCGTTGCCGTACAGAAAGTCATGGAGTCGATGATACAACAGGATGGGGCCAAATTAATCTTTGCAACGTCATACGGCTATTTTGATCCTCATGTACTGAAGATGGCGGAGAAATATCCTAACGTTCGTTTCGCCCACTGTGGCGGTTTATGGTCTGAAGGTAAACCCAAGAATGTAGGCAGTTTCTTTGGTTATATAGATGAGTGCGAGTATTTGAGCGGTATTGTTGCGGCACATGCTAGCAAGAGTAAAAAACTCGGTTTTATCGCAGCCAAGCCTATCCCGCAGGTGTTACGTAACATCAACGCGTTCACACTCGGTGCACAGTCTGTTGATCCCGCGATCACTACCCATGTCATCTTTACTGGCGACTGGTCACTACCTGTTAAAGAAGCTGAGGCTGCCAATAGCTTGATAGATCAGGGCTGTGACGTACTGACTTGCCATGTCGACGGACCAAAAGTAATTGTTGAAACGGCTGAAAAAAGAGGCGTCTATTCTTGTGGCTACCATGCCAGTCAAGCCGCACTGGCACCCAAAGGGTATTTGACTGGTGCGGAATGGGATTGGACCACTCCTTATAAAACATTGGTACTTGCCGCACAGGAAGATAAACCCATGGTTAATTTCCTTCGTGGTGGCTTGAAGGAAGGTTTCGTTAAAATGAGCCCTTATGGTAAAGCTGTTACTGCCAAAGCCAAAGCCGCAGCGGATGGCATCAAAGCCAAAATGCTGAAAGGTGATTTTGTGATTTTCAAAGGCCCTATCAAGGACAATGCGGGTAATACCGTTATTCAAGCGGGTGTCAGCCAAGGTCAGCAAGATGTTGTTCTGGAAAAAATGAGCTATCTGGTAGCGGGTGTGGTGGGTAAAGCCTGA
PROTEIN sequence
Length: 375
MRKFDFSVPRRTFLKTVGVATVMTTLGPLASRAALAADKLTVGVIYVGPRGDFGYNQSHAQAAANIKKLAGIKVVEEEKVSETVAVQKVMESMIQQDGAKLIFATSYGYFDPHVLKMAEKYPNVRFAHCGGLWSEGKPKNVGSFFGYIDECEYLSGIVAAHASKSKKLGFIAAKPIPQVLRNINAFTLGAQSVDPAITTHVIFTGDWSLPVKEAEAANSLIDQGCDVLTCHVDGPKVIVETAEKRGVYSCGYHASQAALAPKGYLTGAEWDWTTPYKTLVLAAQEDKPMVNFLRGGLKEGFVKMSPYGKAVTAKAKAAADGIKAKMLKGDFVIFKGPIKDNAGNTVIQAGVSQGQQDVVLEKMSYLVAGVVGKA*