ggKbase home page

RTP_02272018_0_2um_scaffold_2515_9

Organism: RTP_02272018_0_2um_Betaproteobacteria_47_68

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: 7828..8151

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein id=24403784 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 104.0
  • Bit_score: 112
  • Evalue 1.90e-22
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 104.0
  • Bit_score: 111
  • Evalue 1.20e-22
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 102.0
  • Bit_score: 112
  • Evalue 3.40e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGTACACATTTATTGAGTTACCAATATTTACTCGTCATGCGATGGATTATTTCAGCGACGACTCACTAGCTGAATTGCAAACATCTCTTGCAAAAGATCCAAATCAAGGTGATGTAGTACCTGGTACGCGCGGAGTGCGTAAGTTACGCTGGTCGCGAGTGGGAATGGGAAAACGTGGAGGTGTACGGGTTTTATACTATGTGCAGGATAAGTTAGGTCGTATCTGGCTGCTAACTGTCTATGCAAAAAGCGCGCGCGAAAATATCGACGTTTCCACATTAAATACTTTACGAGAGGTGGCCGATCATGCCGAAATTATCTGA
PROTEIN sequence
Length: 108
MYTFIELPIFTRHAMDYFSDDSLAELQTSLAKDPNQGDVVPGTRGVRKLRWSRVGMGKRGGVRVLYYVQDKLGRIWLLTVYAKSARENIDVSTLNTLREVADHAEII*