ggKbase home page

RTP_07252018_0_1um_scaffold_1436_12

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(12938..14947)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036DA8C9 similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 691.0
  • Bit_score: 1062
  • Evalue 0.0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 671.0
  • Bit_score: 971
  • Evalue 1.10e-280
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 672.0
  • Bit_score: 1102
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2010
ATGCAATTGTATTGTAATTCACTTACAGCGTACCAGCGCCTGCTTACCCGGGAGGTAAAAATCGGCGATCTGTTATTGGGTAATGGTCACCCCATCCGGTTACAGACCATGACCACCACCGATACGCTGAATACCCTCGCTACGGTTGAGCAGAGTATCCGCTGTATTGAAGCGGGTGCAGAACTGGTTCGTATTACCGCCCCCAGCAAAAACGAAGCAGAGAACCTGCTGAATATCAAAAACGAATTACGGAAGAGAGGTTATAGCACCCCACTGGTGGCCGATATACACTTTACACCCAATGCGGCTGAAATAGCTGCCCGCATTGTGGAGAAAGTGAGAGTGAACCCGGGTAACTATGTAGACAAGAAAAAATTTGAACAGATCGATTATACCGATGCGGAATACCTCGAAGAGATAGACCGCATCCGCGAACGGTTTACACCGCTGGTTAAGATCTGTAAAGAATACGGAACCGCCATGCGGATCGGTACTAACCACGGCTCGCTGAGCGACAGGATCATGAGTCGCTATGGTGATACACCGATGGGTATGGTAGAAAGTGCCATGGAGTTTTTACGCATTGCACGCAGCGAAACCTATCACAATATTGTACTGAGCATGAAAGCCAGCAACCCGCAGGTAATGGTGCAGGCTTACCGTTTGCTGATACAGCAGATGGATGCAGAGTTTGGCGAATCTTATCCCCTGCACCTCGGGGTTACCGAAGCCGGTGATGGTGAAGATGGCCGCGTGAAAAGCGCAGCAGGCATTGGTACATTACTGGAAGATGGGATCGGCGATACTGTAAGAGTGAGTTTAACCGAGGACCCCGAGTTTGAAATTCCCGTTTGCCGTGATCTGGTGAAGCGGTATACAAACAGAGGATCATCGATCATTACCATTCCTGCCATTGAAAAGATCCCGTATAGTCCTTTTACCTACCAGCGCAGAGAAAGTTTTGCGGTGGCCAATATTGGTGCCAAACAGGTGCCGGTGGTGATTGCTGATCTGAGTAAGATCGAAAGCATTACACCACAACACCTGCAAAGTGTGGGGTATACCTATGATGCAGTGTCTGATAAATGGAATATCAGTGATTCAGCTGCTGATTATATTTTTACCGGTCACCAGCTGCTGGACTTTGCGTTGCCGGGCACATTACGTGTCATCACGTATCCTGCTACCTGGGTAAATGTACAGGACAAAGAAAAATATCTCCCGATTTTTGATGCATCCGGTTTTGTAGCAGCTGAGCAGAAAAGCAGCCTGCTCAATTTTGTCATGGTGGATTGTTTTAGTGATGAAACGCCCATTAACGATTATACTTATTTGGATGAACTGGCGAATGATAAAACGGTAGTGCTCTGCGTAAGTAGCACCAATCCCCATGCCATGCCCGCCGTTCGCCGTATGTTCATGGAGCTGATGAACCGTAAGATCCAGAACCCGGTGATCCTGATCACTGATAGTAACTGGCAAACAACGGATGAACACCTGATCCATTATTCTACAGAATGTGGCGCCCTGTTCCTGGATGGTTTTGGTGATGGTATCTGCCTGGGTATGACGTCCGAAAGTTACCGGCAACTCTCGCAGGGCAAACAGGATACCAGCGGAAGAAACTATGGCAGCAATACCTCCGTTGAGCAATTTGTGAATGCCACCGCTTTCACGATTCTGCAGGCAACCCGCACAAGAATTTCCAAAACAGAATATATCAGCTGCCCCAGTTGCGGAAGAACTTTGTTTGACCTGCAGGAAACCACCGCTAAGATCCGTAAGGTAACGCATCACCTCAAAGGGGTTAAGATCGCCATCATGGGTTGTATTGTAAATGGCCCCGGCGAAATGGCCGATGCTGATTTTGGATACGTGGGCAGTGGTCCGGGCAAAATCACTTTGTATAAGGGAAAAGAAATCATGAAGAGAAATATTGAAAGTGAGATTGCGGTAGATGAGCTGATCAATTTATTGAAAGAAAGTGATGCCTGGGTGGAACCCGCTTAA
PROTEIN sequence
Length: 670
MQLYCNSLTAYQRLLTREVKIGDLLLGNGHPIRLQTMTTTDTLNTLATVEQSIRCIEAGAELVRITAPSKNEAENLLNIKNELRKRGYSTPLVADIHFTPNAAEIAARIVEKVRVNPGNYVDKKKFEQIDYTDAEYLEEIDRIRERFTPLVKICKEYGTAMRIGTNHGSLSDRIMSRYGDTPMGMVESAMEFLRIARSETYHNIVLSMKASNPQVMVQAYRLLIQQMDAEFGESYPLHLGVTEAGDGEDGRVKSAAGIGTLLEDGIGDTVRVSLTEDPEFEIPVCRDLVKRYTNRGSSIITIPAIEKIPYSPFTYQRRESFAVANIGAKQVPVVIADLSKIESITPQHLQSVGYTYDAVSDKWNISDSAADYIFTGHQLLDFALPGTLRVITYPATWVNVQDKEKYLPIFDASGFVAAEQKSSLLNFVMVDCFSDETPINDYTYLDELANDKTVVLCVSSTNPHAMPAVRRMFMELMNRKIQNPVILITDSNWQTTDEHLIHYSTECGALFLDGFGDGICLGMTSESYRQLSQGKQDTSGRNYGSNTSVEQFVNATAFTILQATRTRISKTEYISCPSCGRTLFDLQETTAKIRKVTHHLKGVKIAIMGCIVNGPGEMADADFGYVGSGPGKITLYKGKEIMKRNIESEIAVDELINLLKESDAWVEPA*