ggKbase home page

RTP_07252018_0_1um_scaffold_2435_3

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 2870..3643

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase/reductase SDR id=1772049 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 257.0
  • Bit_score: 265
  • Evalue 5.40e-68
short chain dehydrogenase/reductase family oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 263.0
  • Bit_score: 182
  • Evalue 1.00e-43
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 257.0
  • Bit_score: 350
  • Evalue 1.40e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 774
ATGAATCTCCATCTATCTAACCAGTTGTTTATTGTAACGGGTGCCAGTTCGGGTTTTGGTAAAGCTATTGCCAAAGCATTACTCGCAGAAGGCGCCGCTATTATTGCGGTAGCGAGAGGCGCAGAAAAACTGCAAATATTGGCTGCACTGGCCCCAGACAGGGTGGAGGTTTTGGCGGGAGATATCACCGATAGCAAAGTAATTCAGCAGCTGGTAAACCAACTGGGTAACCGGCAATTGCATGGCCTGGTGGTAAATGCAGGCGGACCACCCGCCAAAATGGTGCTGGAAACAACGCTGGAAGATTGGGACAATGCCTACCGAACACTTCTTCGCTGGAAAGTGGAACTGACGCAGGCCCTGGTTCCGAAAATGATCGCGAATAGCTATGGCCGTGTAGTGTTTATAGAAAGCTCTTCGGTAAAACAGCCGCTTGAAAACCTGGTGCTCAGCAGCTCATTGCGGGTGGCCGTGGTGGGCATGGTAAAAACCCTGTCGCAGGAAATTGCCAGAACCGGGGTAACGCTGAATATCCTTGGCCCGGGCTCGCATAATACGGCTGCTATTGACCGCATATACCAGAAAAAAAGTGAGCAGACCGGTTTGCCTGTGGCCGAAGTGAGGGAGAAAGCCATTGCCCAGATCCCGGTAGGCGCGTTGGGCGAAGCCAGTGATTTTGCCAGTCTGGCTCTCTGGTTGCTCAGTCCGCTAAGCAGGTACACCACCGGACAAACCATCACACTAGATGGTGGCTCGGTAAAAAGCATGCTATAA
PROTEIN sequence
Length: 258
MNLHLSNQLFIVTGASSGFGKAIAKALLAEGAAIIAVARGAEKLQILAALAPDRVEVLAGDITDSKVIQQLVNQLGNRQLHGLVVNAGGPPAKMVLETTLEDWDNAYRTLLRWKVELTQALVPKMIANSYGRVVFIESSSVKQPLENLVLSSSLRVAVVGMVKTLSQEIARTGVTLNILGPGSHNTAAIDRIYQKKSEQTGLPVAEVREKAIAQIPVGALGEASDFASLALWLLSPLSRYTTGQTITLDGGSVKSML*