ggKbase home page

RTP_07252018_0_1um_scaffold_3201_6

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 4227..5966

Top 3 Functional Annotations

Value Algorithm Source
Putative PAS/PAC sensor protein id=4690143 bin=GWC2_Bacteroidetes_40_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 30.2
  • Coverage: 490.0
  • Bit_score: 214
  • Evalue 1.90e-52
signal transduction histidine kinase, nitrogen specific, NtrB similarity KEGG
DB: KEGG
  • Identity: 31.7
  • Coverage: 410.0
  • Bit_score: 195
  • Evalue 3.40e-47
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 233.0
  • Bit_score: 219
  • Evalue 1.10e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1740
GTGAAAGAGCTGAAAGTGTCTACCCTCGACGATGCCTATGGCCAGGGGCCAACGGGCAGGGCTTACAGAACGGGTAAATATTATTACTGTAATGATATAGCCAACGACCCCATTATGGTTACCTGGGCACCCCGTGCTATGGAGAGAGGTTTCCGTTCTTCCATTGCGTTGCCCGTGAAAGCAGAAGCGAAAGTGGTGAGCGTGGTTACGCTCTATGCTCCCCAGCCTTTTTTCTTTACAGATGAAGAGATCCGGTTATTACTGCGCGTGGCCGAAAACATCAGTTTTGCGATCACAGCTTTTGCAAATAACCAGAAACGGATAACAGCAGAAAAACAATTACAGAAAGTTACCCAGGCTGTTGAACATAGTTCGGCTTCTATCGTCATCACCAATATCAATGGCGATATAGAATATGTAAACCCTGCTTTTACAAAACTGACCGGCTATGAAATGGAGGAAGTAACCGGACAGAATCCGCGGGTATTAAAAACCGGACATACCAGTTTGGGCGAGTACGAAAAAATGTGGTACGCCATCACCCATTTCAAAACCTGGGAGGGTGAGTTTCTGAATAAAAAGAAAAACGGCGAAACTTACTGGGAGCATGCTGTTATTTCTCCTATCATGAACGAACAGCGGGAAATCACCCATTTTGTAGCCGTAAAAGAGAATATTACCGAACGCAAACGGATAGAAGAGGAGCAGAAACGGTTACTAGATGTATTTGAGAATACCAATGCTTTTGTAGCAACCTGCGATATGTCGCGAAGGTTCATTTATGGCAACAAAGCCATTCGTGATATCCTGGAAATTGAAGGAGATGATATTACTCAATATCTCGTAGATGATTTCAGGGGTGATGAAGGCTTTAAAGTACTCGAAGAGATGGATGCCGCTTTACAGAAAACGGGGAAATGGATCGGCGAAAACACTTACCGGTCAAGATCGGGAAAAGAGATTCCTGTGATGCAGGTAGTGGTATTGCACAAAGACCAAACCGGAATAAATACGCAGATCTCTACCACTGCTATTGATTTATCGAGGGTAAAAGAAACAGAGAAAGACCTGCTGCGCCTTAACCACGAACTGCGCGAGTTTTCAAGGCACCTGCAGTCTGTGCGTGAAGTAGAAAAAAACAAAATCCTGAGCGAAGTGCATGATGAACTGGGTCAGGGGCTGGCGGCATTGATGATTGATGTATCATGGATCAAAAAACACCTGAGAGACGAAGACCCCACGCTGGTATCGAAGAAAATTGATGGATTGCTGGACGCAATCTCGGGCAATATTGATGCTTTCTCGCGCATCTACAGTTCTATGAACCCTTCTATGTTAAGCGAACTGGGCCTTCATGCTTCTCTCGAATACCTTGTCAGTTCCTTTGCCAAATCAAGCAGCGTTCAGATACGTTTTGCTTCCAATATAGAGAACGAACCGATTCATCATAACCAAAGCCTGTCTTTGTACCGGATTATTCAGGAAGCATTGGTGAATATTAAACAACATGCAAAGGCCAGTCAGGCAACAGTTTCGCTGATCAGGGTAGACGGTATGCTGGATCTGTCTATAGAAGATGATGGTATCGGATTTTCACCTTCGGCGGTAGATTCCGGCAACCATTATGGTCTGCTCGAAATCAGGGAGAGAATCTATGCCATGAACGGAACTTTTACCCTGATATCCGCACCCGGGCAGGGTACCAAGTTGCAGATTCAGCTTCCCTTAGAGAAACGTTAA
PROTEIN sequence
Length: 580
VKELKVSTLDDAYGQGPTGRAYRTGKYYYCNDIANDPIMVTWAPRAMERGFRSSIALPVKAEAKVVSVVTLYAPQPFFFTDEEIRLLLRVAENISFAITAFANNQKRITAEKQLQKVTQAVEHSSASIVITNINGDIEYVNPAFTKLTGYEMEEVTGQNPRVLKTGHTSLGEYEKMWYAITHFKTWEGEFLNKKKNGETYWEHAVISPIMNEQREITHFVAVKENITERKRIEEEQKRLLDVFENTNAFVATCDMSRRFIYGNKAIRDILEIEGDDITQYLVDDFRGDEGFKVLEEMDAALQKTGKWIGENTYRSRSGKEIPVMQVVVLHKDQTGINTQISTTAIDLSRVKETEKDLLRLNHELREFSRHLQSVREVEKNKILSEVHDELGQGLAALMIDVSWIKKHLRDEDPTLVSKKIDGLLDAISGNIDAFSRIYSSMNPSMLSELGLHASLEYLVSSFAKSSSVQIRFASNIENEPIHHNQSLSLYRIIQEALVNIKQHAKASQATVSLIRVDGMLDLSIEDDGIGFSPSAVDSGNHYGLLEIRERIYAMNGTFTLISAPGQGTKLQIQLPLEKR*