ggKbase home page

RTP_07252018_0_1um_scaffold_5034_8

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(6547..7950)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ELQ8_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 450.0
  • Bit_score: 526
  • Evalue 1.40e-146
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 450.0
  • Bit_score: 526
  • Evalue 3.90e-147
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 447.0
  • Bit_score: 760
  • Evalue 8.00e-217

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1404
ATGAGAAAAAAACTACTGGCAGTACTATGTATGTGCGCCATTGTTGTTGTGGGCTATTCACAAACAACCGTATCGGGTAAAATCACCGATGCCGCAACTGGCATTCCCTTGTCAGGGGTAACTGTAAAAGGAAAAGGCACTGCTGTTGCATCCGTTTCTGATGCAGACGGCAAATACAGCATTAAGCTGGCCACAAGCGTTAAAACATTGATTTTTTCGTTTGTAGGCTATTCCGATTTTGAAGCTGCCGTACGGGCAGGAAATCTGGATGTATCGCTTGCCAGTTCCGTTTCCAATCTTACCGAAGTAATTGTTACCGGTTTTGGTGGTTCTCAGATCAAAAGAGAATTGACCGGTAATATTGCGCGCGTGAGAGGTAAGGATATCGAGTACCTGCCCACACCCAGCGTAGACGCTGCTTTGCAGGGTAAAGCAGCCGGTGTATTTGTAAACAGCCAATCCGGAAAACTGGGCCAGGCGGTAACGGTACGTGTAAGAGGTAACTCTTCTATCAGTGCCAACAGCCAGCCCTTATATGTATTGGATGGTATTCCTATGACGGCTAACAGCCAGAGTTCATATGGTGGTGCTACCAACCCATTAACCGATCTGAACCCGAATGATATTGAGTCGATCGAAGTATTGAAAGATGCTTCTGCCGGTGCCATCTTCGGTTCCAGAGCTGCCAATGGGGTAGTCTTGATTACTACCAAGAGAGGTAAAGCAGGAAAAACGTCTGTTACATTTAACTACCAGACAGGTTCTGCAGAAGCATCCAAGCGTATCAAAATGCTGAATTCGCAGGAATATGCTTTGCTGATACTGGAAGGTGCCAAATACCGTGATGATCTGGATGGAACGCCGGTAAATGACCCCAGCAGCTGGACCACTTATGTGAAAAATGATGTAATGGATTACTACAGTTATGGTGGCTGGAGTAAAGACCCTACCAAAACGTATGACTGGCAGGACCAGGTATTTCAGAAAGGACCATACAGACAGGCCGATCTGCAGATCAAAGGTGGAACTGACAAAACAAAATTCTTCTCTTCTTTTCAGCAGCTGGATCAGACGGGTACTATGATCGGTAACAAGATCTCAAGAACCACCGGTCGCCTGAACATCGATCAGAAAGCAAATGACTGGTTAGACCTTGGTGTATCTCTGAGTTTATCCAGAACCTATAACCAACGTCTTCCGGATGATAATGCCTTCTCTAATCCATTACAGGCAATCGCATTAATGCCGATGACTCCTTTTACAGATCCTAATACAGGGCTGCCTACAGGTACACCTCCCGGTGATGTGAATATTCCGGTGTATTATAACCCGGTTCTTANNNNNNNNNNNNNTATGCTTCTTATGCGCAGGATGTTTACAGAACTTTCGGTAATGCTTACCTGA
PROTEIN sequence
Length: 468
MRKKLLAVLCMCAIVVVGYSQTTVSGKITDAATGIPLSGVTVKGKGTAVASVSDADGKYSIKLATSVKTLIFSFVGYSDFEAAVRAGNLDVSLASSVSNLTEVIVTGFGGSQIKRELTGNIARVRGKDIEYLPTPSVDAALQGKAAGVFVNSQSGKLGQAVTVRVRGNSSISANSQPLYVLDGIPMTANSQSSYGGATNPLTDLNPNDIESIEVLKDASAGAIFGSRAANGVVLITTKRGKAGKTSVTFNYQTGSAEASKRIKMLNSQEYALLILEGAKYRDDLDGTPVNDPSSWTTYVKNDVMDYYSYGGWSKDPTKTYDWQDQVFQKGPYRQADLQIKGGTDKTKFFSSFQQLDQTGTMIGNKISRTTGRLNIDQKANDWLDLGVSLSLSRTYNQRLPDDNAFSNPLQAIALMPMTPFTDPNTGLPTGTPPGDVNIPVYYNPVLXXXXXMLLMRRMFTELSVMLT*