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RTP_07252018_0_1um_scaffold_6142_2

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(1523..3112)

Top 3 Functional Annotations

Value Algorithm Source
Glycoside hydrolase family 28 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1U4_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 530.0
  • Bit_score: 796
  • Evalue 1.40e-227
glycoside hydrolase family protein similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 530.0
  • Bit_score: 796
  • Evalue 3.90e-228
Glycoside hydrolase family 28 {ECO:0000313|EMBL:ACU05086.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 530.0
  • Bit_score: 796
  • Evalue 2.00e-227

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1590
ATGAAAAAATTATATGTTGTTGTTACCCTGCTGATAACTACTGTTGTGGCAAACGCACAGAAAGAAGTGATCATCAGCCAACACGGAGCCGTGGCAGATGGAAGAACGGTGAATACCAGGATCATACAAAAGCTGATCGATGAGCTGTCTGCAACTGGCGGTGGTAAACTGATCGTACCTCCCGGTAATTATATGACAGGAACCCTGGAGCTGAAATCAGGTGTGGAACTTCATGTGGCATTGGGAGCTGTGTTACTGGGCTCTCATCTTACCAACGATTACAAAAAACTGGCCGGTCGTGCAGCCTTAATCATCGCAGAGGGACAAAAAAATATTTCTATTACCGGAGAGGGGATTATTGATTTTCAGGGCCAGGAGCTCATGCTGGATGTGTTTAAAAAATTAAGAAGTGGAGAAGTGAAGTCAGACTCAGCCTGGTTGCTGAAAAGACCCGGTCCGGGACGCGCACTGGGATTGTACCTGAAAGGCTGTAAGAATGTTACCGTGACAGGTATTACGCTGAAAAATACTTCTGACTGGGTGCAGGATTACCGGGAATGTGATGGTGTGGTTATTGACAGGATCACCGTACAGAGTACCGCTTACTGGAACAATGACGGACTGGATGTGACAGATTCTAAAAATGTACGTATCACCAATTGTTTTATCAATGCATCGGATGATGCGCTTTGTTTTAAATCAGATAATCCAAATAGCTCCTGCGAAAATGTGTACGTAAACAACTGTACTTTACGTTCCAGTGCCAACGGTTTGAAGTTTGGTACCGCCAACCATGGTGGCTTCCGGAATTTCAAGATTACCAATCTTACCATTTTTGATACGTATCGTTCAGCCATTGCACTGGAATCGGTAGATGGAGGTTTTATGGAGAATATTGATATCCGGGATGTACAGGCCAAAAATACGGGCAATGCCATTTTTATCCGTCGCGGCCGCAGAAATGCCACCGGCGAAGTGGGTACACTCAAAGATATTTACATCGCTAATGTAAAAGTGGAAACACCTTTGCTGAAGCCAGATCAGGGCTATCCGATTGAAGGACCGCCGGATCATTTACGTCCGGGTTTTGATAAAATGCCTGTGCGTCCTTCTCATTTTCATATCTATGGGCATCCCTATCTGCCGTATAACCTGGTGCCTTCTTCAATTGTGGGATTGCCCGGATATCCTGTGCAAAATGTGACGCTGGAAAATATTGAGATCAGTTATGGCGGAAGGGGGGATAAATCTATTGCACATATTCCCTTAACAGAAATCACCCGCATCCCTGAAAATGCGGCCGCTTATCCTGAGTTCTCCATGTTTGGTGAATTGCCTGCCTGGGGATTATACATGCGGCATGCAGAGGGGATACAATTAAAGAATGTAAAAGTTAGCTACCTCGAAGACGATTTCAGGCCCGCATTTGTTTTGGATGATGTAAAGCGGATCACATTCACTGATGTTCAGATTCTTACAGCGAAAGAAATGCCGGTGATACAACTGAACAATGCGAGTAACGTGAATTTTAAAAATCTCCGGATGCCGGTTTCGGAAGCGAAGGGCATTCTGAAAACAGATTATAAATAA
PROTEIN sequence
Length: 530
MKKLYVVVTLLITTVVANAQKEVIISQHGAVADGRTVNTRIIQKLIDELSATGGGKLIVPPGNYMTGTLELKSGVELHVALGAVLLGSHLTNDYKKLAGRAALIIAEGQKNISITGEGIIDFQGQELMLDVFKKLRSGEVKSDSAWLLKRPGPGRALGLYLKGCKNVTVTGITLKNTSDWVQDYRECDGVVIDRITVQSTAYWNNDGLDVTDSKNVRITNCFINASDDALCFKSDNPNSSCENVYVNNCTLRSSANGLKFGTANHGGFRNFKITNLTIFDTYRSAIALESVDGGFMENIDIRDVQAKNTGNAIFIRRGRRNATGEVGTLKDIYIANVKVETPLLKPDQGYPIEGPPDHLRPGFDKMPVRPSHFHIYGHPYLPYNLVPSSIVGLPGYPVQNVTLENIEISYGGRGDKSIAHIPLTEITRIPENAAAYPEFSMFGELPAWGLYMRHAEGIQLKNVKVSYLEDDFRPAFVLDDVKRITFTDVQILTAKEMPVIQLNNASNVNFKNLRMPVSEAKGILKTDYK*