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RTP_07252018_0_1um_scaffold_11629_1

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 1..171

Top 3 Functional Annotations

Value Algorithm Source
dipeptide/oligopeptide ABC transporter; K02032 peptide/nickel transport system ATP-binding protein id=5082005 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 53.0
  • Bit_score: 112
  • Evalue 7.50e-23
Stage 0 sporulation protein KE {ECO:0000313|EMBL:EWS62828.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 53.0
  • Bit_score: 112
  • Evalue 1.10e-22
peptide ABC transporter ATPase similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 53.0
  • Bit_score: 106
  • Evalue 2.00e-21

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Taxonomy

Hydrogenophaga sp. T4 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
GAGCTGGCCCCCAAACACACGCTGTTCGACAGCCCGCGCCATCCTTACACGCGCATGCTGCTGGATGCGATTCCGAAGATGCACGACACCGGCCGCGCGCGCACGCCGGTTTCGGGCGAAGTCCCCAACCCGCTGAACCCGCCTACCGGCTGTGCCTTATTATGTGGATAG
PROTEIN sequence
Length: 57
ELAPKHTLFDSPRHPYTRMLLDAIPKMHDTGRARTPVSGEVPNPLNPPTGCALLCG*